LOCUS       AEC10198.1               428 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana phytochrome interacting factor 4 protein.
ACCESSION   CP002685-6584
PROTEIN_ID  AEC10198.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="PIF4"
                     /locus_tag="AT2G43010"
                     /gene_synonym="AtPIF4"
                     /gene_synonym="MFL8.13"
                     /gene_synonym="MFL8_13"
                     /gene_synonym="phytochrome interacting factor 4"
                     /gene_synonym="SRL2"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EL284780.1,INSD:EL285389.1,INSD:AV827464.1,
                     INSD:EL239256.1,INSD:EH909752.1,INSD:DR749594.1,
                     INSD:EL208465.1,INSD:T04514.1,INSD:EL094881.1,
                     INSD:BP834092.1,INSD:BP657776.1,INSD:AV526185.1,
                     INSD:BP816177.1,INSD:BP840028.1,INSD:BX837187.1,
                     INSD:BP643908.1,INSD:EH855150.1,INSD:BP843580.1,
                     INSD:BP848428.1,INSD:EL303618.1,INSD:BE526204.1,
                     INSD:AV807001.1,INSD:BP606834.1,INSD:DR368505.1,
                     INSD:BP846421.1,INSD:EL326578.1,INSD:EL018177.1,
                     INSD:EH917289.1,INSD:BP645754.1,INSD:BP638121.1"
                     /note="phytochrome interacting factor 4 (PIF4); CONTAINS
                     InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain
                     (InterPro:IPR001092), Helix-loop-helix DNA-binding
                     (InterPro:IPR011598); BEST Arabidopsis thaliana protein
                     match is: phytochrome interacting factor 3-like 6
                     (TAIR:AT3G59060.1); Has 4535 Blast hits to 4529 proteins
                     in 355 species: Archae - 0; Bacteria - 0; Metazoa - 936;
                     Fungi - 188; Plants - 3370; Viruses - 2; Other Eukaryotes
                     - 39 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G43010"
                     /db_xref="TAIR:AT2G43010"
     intron_pos      22:2 (1/5)
     intron_pos      241:0 (2/5)
     intron_pos      268:0 (3/5)
     intron_pos      290:0 (4/5)
     intron_pos      396:0 (5/5)
BEGIN
        1 MEHQGWSFEE NYSLSTNRRS IRPQDELVEL LWRDGQVVLQ SQTHREQTQT QKQDHHEEAL
       61 RSSTFLEDQE TVSWIQYPPD EDPFEPDDFS SHFFSTMDPL QRPTSETVKP KSSPEPPQVM
      121 VKPKACPDPP PQVMPPPKFR LTNSSSGIRE TEMEQYSVTT VGPSHCGSNP SQNDLDVSMS
      181 HDRSKNIEEK LNPNASSSSG GSSGCSFGKD IKEMASGRCI TTDRKRKRIN HTDESVSLSD
      241 AIGNKSNQRS GSNRRSRAAE VHNLSERRRR DRINERMKAL QELIPHCSKT DKASILDEAI
      301 DYLKSLQLQL QVMWMGSGMA AAAASAPMMF PGVQPQQFIR QIQSPVQLPR FPVMDQSAIQ
      361 NNPGLVCQNP VQNQIISDRF ARYIGGFPHM QAATQPMEML RFSSPAGQQS QQPSSVPTKT
      421 TDGSRLDH
//