LOCUS AEC10189.1 257 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Putative AT-hook DNA-binding family
protein protein.
ACCESSION CP002685-6567
PROTEIN_ID AEC10189.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G42940"
/gene_synonym="AHL16"
/gene_synonym="AT-hook motif nuclear-localized protein 16"
/gene_synonym="F23E6.8"
/gene_synonym="F23E6_8"
/gene_synonym="TEK"
/gene_synonym="TRANSPOSABLE ELEMENT SILENCING VIA AT-HOOK"
/inference="Similar to RNA sequence,
EST:INSD:DR282299.1,INSD:DR382729.1,INSD:AV532346.1,
INSD:DR282300.1,INSD:AU228862.1,INSD:BP600586.1,
INSD:DR282298.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT010721.1,INSD:BT010995.1"
/note="Predicted AT-hook DNA-binding family protein;
FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process
unknown; LOCATED IN: chloroplast; EXPRESSED IN: leaf
whorl, sepal, flower; EXPRESSED DURING: petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF296
(InterPro:IPR005175), AT hook, DNA-binding motif
(InterPro:IPR017956), Predicted AT-hook DNA-binding
(InterPro:IPR014476); BEST Arabidopsis thaliana protein
match is: Predicted AT-hook DNA-binding family protein
(TAIR:AT2G35270.1); Has 767 Blast hits to 762 proteins in
28 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi
- 0; Plants - 756; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink)."
/db_xref="Araport:AT2G42940"
/db_xref="TAIR:AT2G42940"
BEGIN
1 MAGGTALTPT SVGSKSVPMR NHEATERGNT NNNLRALPKA VQPVSSIEGE MAKRPRGRPA
61 GSKNKPKPPI IVTHDSPNSL RANAVEISSG CDICETLSDF ARRKQRGLCI LSANGCVTNV
121 TLRQPASSGA IVTLHGRYEI LSLLGSILPP PAPLGITGLT IYLAGPQGQV VGGGVVGGLI
181 ASGPVVLMAA SFMNAVFDRL PMDDDEAASM QNQQYYQNGR SRPLDDIHGL PQNLLTNGNS
241 ASDIYSWGPA QRVMSKP
//