LOCUS AEC10187.1 559 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR-like)
superfamily protein protein.
ACCESSION CP002685-6565
PROTEIN_ID AEC10187.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G42920"
/gene_synonym="F23E6.4"
/inference="Similar to RNA sequence,
EST:INSD:AU237772.1,INSD:DR282299.1,INSD:DR382729.1,
INSD:DR282300.1,INSD:ES073327.1,INSD:AU228862.1,
INSD:BP600586.1,INSD:DR282298.1"
/inference="similar to RNA sequence, mRNA:INSD:AK229283.1"
/note="Pentatricopeptide repeat (PPR-like) superfamily
protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide
repeat (InterPro:IPR002885); BEST Arabidopsis thaliana
protein match is: Pentatricopeptide repeat (PPR)
superfamily protein (TAIR:AT5G48910.1); Has 37919 Blast
hits to 14277 proteins in 266 species: Archae - 0;
Bacteria - 16; Metazoa - 156; Fungi - 107; Plants - 36994;
Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink)."
/db_xref="Araport:AT2G42920"
/db_xref="TAIR:AT2G42920"
BEGIN
1 MSPTILSFSG VTVPAMPSSG SLSGNTYLRL IDTQCSTMRE LKQIHASLIK TGLISDTVTA
61 SRVLAFCCAS PSDMNYAYLV FTRINHKNPF VWNTIIRGFS RSSFPEMAIS IFIDMLCSSP
121 SVKPQRLTYP SVFKAYGRLG QARDGRQLHG MVIKEGLEDD SFIRNTMLHM YVTCGCLIEA
181 WRIFLGMIGF DVVAWNSMIM GFAKCGLIDQ AQNLFDEMPQ RNGVSWNSMI SGFVRNGRFK
241 DALDMFREMQ EKDVKPDGFT MVSLLNACAY LGASEQGRWI HEYIVRNRFE LNSIVVTALI
301 DMYCKCGCIE EGLNVFECAP KKQLSCWNSM ILGLANNGFE ERAMDLFSEL ERSGLEPDSV
361 SFIGVLTACA HSGEVHRADE FFRLMKEKYM IEPSIKHYTL MVNVLGGAGL LEEAEALIKN
421 MPVEEDTVIW SSLLSACRKI GNVEMAKRAA KCLKKLDPDE TCGYVLLSNA YASYGLFEEA
481 VEQRLLMKER QMEKEVGCSS IEVDFEVHEF ISCGGTHPKS AEIYSLLDIL NWDVSTIKSG
541 FAELFDATTR IGFTYLAEK
//