LOCUS AEC10175.1 248 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana K-box region and MADS-box transcription
factor family protein protein.
ACCESSION CP002685-6548
PROTEIN_ID AEC10175.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SHP2"
/locus_tag="AT2G42830"
/gene_synonym="AGAMOUS-like 5"
/gene_synonym="AGL5"
/gene_synonym="F7D19.17"
/gene_synonym="F7D19_17"
/gene_synonym="SHATTERPROOF 2"
/inference="Similar to RNA sequence,
EST:INSD:ES010477.1,INSD:ES171629.1,INSD:ES027753.1,
INSD:ES108605.1,INSD:ES182894.1,INSD:BP639407.1,
INSD:ES209940.1,INSD:EL988596.1,INSD:DR240195.1,
INSD:DR240191.1,INSD:DR240190.1,INSD:DR240200.1,
INSD:ES028752.1,INSD:ES042803.1,INSD:ES102650.1,
INSD:ES015720.1,INSD:ES073769.1,INSD:DR240194.1,
INSD:AU227814.1,INSD:ES142794.1,INSD:ES092434.1,
INSD:ES098791.1,INSD:DR240196.1,INSD:DR240192.1,
INSD:DR240198.1,INSD:ES075268.1,INSD:DR240193.1,
INSD:ES089276.1,INSD:ES051812.1,INSD:ES094239.1,
INSD:ES000558.1,INSD:DR240199.1,INSD:DR240197.1,
INSD:DR240189.1,INSD:BP562882.2,INSD:ES045999.1,
INSD:EL968513.1,INSD:ES095681.1,INSD:ES029487.1,
INSD:ES094334.1,INSD:BP644078.1,INSD:ES096319.1,
INSD:ES060556.1,INSD:ES088699.1,INSD:EL983053.1,
INSD:ES129159.1,INSD:DR375569.1,INSD:ES002372.1,
INSD:ES047585.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT003841.1,INSD:BT029453.1"
/note="SHATTERPROOF 2 (SHP2); FUNCTIONS IN: protein
binding, sequence-specific DNA binding transcription
factor activity; INVOLVED IN: regulation of transcription,
DNA-dependent, ovule development, carpel development;
LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 7 growth stages; CONTAINS InterPro
DOMAIN/s: Transcription factor, MADS-box
(InterPro:IPR002100), Transcription factor, K-box
(InterPro:IPR002487); BEST Arabidopsis thaliana protein
match is: K-box region and MADS-box transcription factor
family protein (TAIR:AT3G58780.1); Has 7166 Blast hits to
7164 proteins in 913 species: Archae - 0; Bacteria - 3;
Metazoa - 641; Fungi - 303; Plants - 6138; Viruses - 0;
Other Eukaryotes - 81 (source: NCBI BLink)."
/db_xref="Araport:AT2G42830"
/db_xref="TAIR:AT2G42830"
intron_pos 76:2 (1/5)
intron_pos 104:0 (2/5)
intron_pos 158:0 (3/5)
intron_pos 174:0 (4/5)
intron_pos 188:0 (5/5)
BEGIN
1 MEGGASNEVA ESSKKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL
61 VIFSTRGRLY EYANNSVRGT IERYKKACSD AVNPPTITEA NTQYYQQEAS KLRRQIRDIQ
121 NLNRHILGES LGSLNFKELK NLESRLEKGI SRVRSKKHEM LVAEIEYMQK RVKEIELQND
181 NMYLRSKITE RTGLQQQESS VIHQGTVYES GVTSSHQSGQ YNRNYIAVNL LEPNQNSSNQ
241 DQPPLQLV
//