LOCUS AEC10161.2 457 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box/FBD/LRR protein protein.
ACCESSION CP002685-6533
PROTEIN_ID AEC10161.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G42730"
/gene_synonym="F7D19.27"
/gene_synonym="F7D19_27"
/inference="Similar to RNA sequence,
EST:INSD:EH854248.1,INSD:DR275237.1,INSD:BX840132.1,
INSD:AU236742.1,INSD:DR275238.1"
/note="F-box family protein; FUNCTIONS IN: zinc ion
binding; INVOLVED IN: transcription; LOCATED IN: nucleus;
CONTAINS InterPro DOMAIN/s: Transcription elongation
factor, TFIIS/CRSP70, N-terminal, sub-type
(InterPro:IPR003617), F-box domain, cyclin-like
(InterPro:IPR001810), FBD-like (InterPro:IPR006566),
Transcription elongation factor S-II, central domain
(InterPro:IPR003618), Transcription factor IIS, N-terminal
(InterPro:IPR017923), Transcription elongation factor
S-IIM (InterPro:IPR017890), F-box domain, Skp2-like
(InterPro:IPR022364), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: FBD, F-box, Skp2-like and Leucine Rich Repeat
domains containing protein (TAIR:AT2G42720.1); Has 2687
Blast hits to 2614 proteins in 178 species: Archae - 0;
Bacteria - 0; Metazoa - 415; Fungi - 138; Plants - 2100;
Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink)."
/db_xref="Araport:AT2G42730"
/db_xref="TAIR:AT2G42730"
intron_pos 307:0 (1/2)
intron_pos 354:0 (2/2)
BEGIN
1 MNAKDVISRL PDEVLGRILS LISTKEAVST SVLSKRWKNM FVLVSNLDID DRQSVPKTKQ
61 NRIEIHRNYM AFVDKLLDTQ RGSSIKKLTL KSHVGVRGGT DSSRIQSWIC NVLDHGVMDL
121 DVFITLKGKS PPVPAMIFKS KTLVKLRVGR GFTIKLSQDV SLPLLRTLCL DSVNFVGGHN
181 VVGTLISRCP VLEELVVEER RCVDWTCSVS SPSLKRLHIR FDRKFTSISL DAPNLIYYKH
241 SGYVLGKYPN VKLDSLIEAR LNLRMDETRM VGVRNGSLGS IPADMRNLIN GIRNVRILHL
301 SSHTLELLYF SCKEMPLFDS LVSLSIGNDK ARGWQMLPLL IKNSPNLETL IFMGLDHYIT
361 NRCGDVCVCY DTDESITSCL SSSQVKVLEI LSYQGTTREL NQMKHFLEKL PCLELVKICV
421 VNNSNNLQTT MEMRNLMMLP RASSKCKIQV KVLTKNN
//