LOCUS AEC10160.1 443 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana FBD, F-box, Skp2-like and Leucine
Rich Repeat domains containing protein protein.
ACCESSION CP002685-6531
PROTEIN_ID AEC10160.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G42720"
/gene_synonym="F7D19.28"
/gene_synonym="F7D19_28"
/inference="Similar to RNA sequence,
EST:INSD:EG445213.1,INSD:EG445215.1,INSD:EG445221.1,
INSD:EG435931.1,INSD:EG435943.1,INSD:EG435942.1,
INSD:EG445223.1,INSD:EG435944.1,INSD:EG435926.1,
INSD:EG445212.1,INSD:EG435945.1,INSD:EG435920.1,
INSD:EG445217.1,INSD:EG445214.1,INSD:EG445216.1,
INSD:EG445222.1,INSD:EG445219.1,INSD:EG435927.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY144114.1,INSD:AY649302.1"
/note="FBD, F-box, Skp2-like and Leucine Rich Repeat
domains containing protein; CONTAINS InterPro DOMAIN/s:
F-box domain, cyclin-like (InterPro:IPR001810), F-box
domain, Skp2-like (InterPro:IPR022364), FBD-like
(InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT2G42730.2); Has
1980 Blast hits to 1943 proteins in 27 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1978;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G42720"
/db_xref="TAIR:AT2G42720"
intron_pos 301:0 (1/2)
intron_pos 348:0 (2/2)
BEGIN
1 MDRISSLPDE ILEHILSFLS TKEAALTSSL STRWKNVFVF VPSLHLDYAR QHENPREFID
61 FVDFVNTLFN RKGNSPIKKL ALKIHLKDNQ SLQNQTHVQS WIHRVLSRGG VTDLDLFITF
121 KGKFQLVPLL IFKSNTLVKL RLGRGFTIKL CHENVYLPML KTLCLDTVDF DGDHNVFETL
181 LPRCPLLEEL VLEDQRWKQW CGSVSSPSLK RLRIRFFHIP IISLDVPGLV YLELSCIFGS
241 KYANVNLDSL VEARLNHWVE EQELRKLRDG SSHLVPADMM DLITGIRKVK VLHLTSDALE
301 LFYFSGQELP MFDNLVYLSI ASDKKQGWQI LPLLIKNSPN LETLVFKGLE HYTTKQCGDA
361 CVCSGILGKS SSCLSSSRVK VLEIWSYQGT SKELKQMGHF LMKLQFLELV KIRAVSNLQV
421 PIDIQYLLKL PRASSNCKIQ AIF
//