LOCUS AEC10152.1 255 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Homeodomain-like superfamily protein protein.
ACCESSION CP002685-6521
PROTEIN_ID AEC10152.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G42660"
/gene_synonym="F14N22.7"
/gene_synonym="F14N22_7"
/inference="Similar to RNA sequence, EST:INSD:EH808748.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY078938.1,INSD:AY074640.1"
/note="Homeodomain-like superfamily protein; CONTAINS
InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057),
Myb, DNA-binding (InterPro:IPR014778), Myb-like
DNA-binding domain, SHAQKYF class (InterPro:IPR006447),
HTH transcriptional regulator, Myb-type, DNA-binding
(InterPro:IPR017930), Homeodomain-related
(InterPro:IPR012287); BEST Arabidopsis thaliana protein
match is: myb-like HTH transcriptional regulator family
protein (TAIR:AT2G38300.1); Has 1621 Blast hits to 1617
proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 1607; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink)."
/db_xref="Araport:AT2G42660"
/db_xref="TAIR:AT2G42660"
intron_pos 75:1 (1/5)
intron_pos 101:0 (2/5)
intron_pos 114:1 (3/5)
intron_pos 152:2 (4/5)
intron_pos 196:0 (5/5)
BEGIN
1 MAGRSSPGKC STWLDLNREE TVEKNNEEES SVEDEDQITN NVRQYIRSNM PRLRWTPDLH
61 LSFVRAVQRL GGPDRATPKL VLEMMNLKGL SIAHVKSHLQ MYRSKKLEPS SRPGFGAFMS
121 GQRSYLMDMI DSRCIPHSDL RHAYNSKTVP SRVLNQDAVV TNLGGNFLMR PSSWFSGLCR
181 NDRDSTENKT LPLLEIRKKN NEKRVRDEEV SSVKRLKSMS GGGIQLPEFG NCRQKPTDDI
241 NTMLSLSLLS TSSEP
//