LOCUS AEC10136.1 139 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana cold-regulated 15a protein.
ACCESSION CP002685-6499
PROTEIN_ID AEC10136.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="COR15A"
/locus_tag="AT2G42540"
/gene_synonym="AtCOR15A"
/gene_synonym="cold-regulated 15a"
/gene_synonym="COR15"
/gene_synonym="F14N22.19"
/gene_synonym="F14N22_19"
/inference="Similar to RNA sequence,
EST:INSD:BE845108.1,INSD:AV791717.1,INSD:CB257354.1,
INSD:DR284794.1,INSD:EG494765.1,INSD:DR284810.1,
INSD:DR284804.1,INSD:BP834137.1,INSD:DR284813.1,
INSD:DR284787.1,INSD:BE845359.1,INSD:AV532212.1,
INSD:DR284814.1,INSD:AV810268.1,INSD:DR284793.1,
INSD:BP630695.1,INSD:DR376938.1,INSD:BE844870.1,
INSD:AV789001.1,INSD:BE844878.1,INSD:CB257350.1,
INSD:AV531954.1,INSD:BE845094.1,INSD:BP560654.3,
INSD:DR284795.1,INSD:CB260296.1,INSD:DR284808.1,
INSD:DR284830.1,INSD:BE844873.1,INSD:DR284792.1,
INSD:AV788342.1,INSD:AV782404.1,INSD:BE845008.1,
INSD:DR284821.1,INSD:BP560652.3,INSD:BP791553.1,
INSD:BE844933.1,INSD:AV813507.1,INSD:BP789133.1,
INSD:DR284816.1,INSD:EL234877.1,INSD:AV804379.1,
INSD:DR284812.1,INSD:DR284806.1,INSD:DR284807.1,
INSD:BP832774.1,INSD:BP780063.1,INSD:EG494766.1,
INSD:DR284790.1,INSD:BE844915.1,INSD:DR284826.1,
INSD:DR284818.1,INSD:BE038895.1,INSD:EG454070.1,
INSD:CD533255.1,INSD:DR284789.1,INSD:DR284820.1,
INSD:AV822210.1,INSD:DR373138.1,INSD:DR284831.1,
INSD:AV795299.1,INSD:BE845371.1,INSD:AV532540.1,
INSD:DR284801.1,INSD:BE037920.1,INSD:BP778055.1,
INSD:AV792947.1,INSD:BE844861.1,INSD:AV820262.1,
INSD:DR284825.1,INSD:AV806568.1,INSD:DR284799.1,
INSD:EG438632.1,INSD:DR284798.1,INSD:CB259895.1,
INSD:BE844843.1,INSD:BE844929.1,INSD:DR284800.1,
INSD:BP631233.1,INSD:BE844943.1,INSD:AV796692.1,
INSD:BP784127.1,INSD:DR284809.1,INSD:CB256683.1,
INSD:EG510459.1,INSD:AV811541.1,INSD:BE844955.1,
INSD:DR284805.1,INSD:BP779158.1,INSD:AV816453.1,
INSD:DR284791.1,INSD:EG453993.1,INSD:BE844855.1,
INSD:DR284811.1,INSD:BP795370.1,INSD:DR284796.1,
INSD:DR284786.1,INSD:EG438620.1,INSD:BE844859.1,
INSD:DR284815.1,INSD:BP793444.1,INSD:CB260250.1,
INSD:DR284797.1,INSD:AV814704.1,INSD:DR377755.1,
INSD:EG453994.1,INSD:DR284803.1,INSD:CB260555.1,
INSD:BP779404.1,INSD:DR284827.1,INSD:DR284817.1,
INSD:DR284788.1,INSD:DR284833.1,INSD:DR284802.1,
INSD:BE844847.1,INSD:AV782414.1,INSD:DR284819.1,
INSD:EG454071.1,INSD:AV803116.1,INSD:AV542380.1,
INSD:BE844842.1,INSD:BE844856.1,INSD:BE844866.1,
INSD:DR284828.1,INSD:BP628312.1,INSD:BP634166.1,
INSD:AV826518.1,INSD:DR284824.1,INSD:AV782901.1,
INSD:CB257460.1,INSD:BP820455.1,INSD:DR284829.1,
INSD:BP628838.1,INSD:DR284822.1,INSD:EL149314.1,
INSD:EG510460.1,INSD:BP782877.1,INSD:DR284834.1,
INSD:DR284823.1,INSD:DR284832.1"
/inference="similar to RNA sequence,
mRNA:INSD:X64138.1,INSD:AY113048.1,INSD:AY057640.1,
INSD:AY039853.1,INSD:AF325007.2"
/note="cold-regulated 15a (COR15A); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: in 9 processes;
LOCATED IN: chloroplast stroma, chloroplast, chloroplast
envelope; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana
protein match is: cold regulated 15b (TAIR:AT2G42530.1);
Has 189 Blast hits to 136 proteins in 40 species: Archae -
0; Bacteria - 9; Metazoa - 3; Fungi - 13; Plants - 155;
Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink)."
/db_xref="Araport:AT2G42540"
/db_xref="TAIR:AT2G42540"
intron_pos 65:2 (1/1)
BEGIN
1 MAMSFSGAVL TGMASSFHSG AKQSSFGAVR VGQKTQFVVV SQRKKSLIYA AKGDGNILDD
61 LNEATKKASD FVTDKTKEAL ADGEKAKDYV VEKNSETADT LGKEAEKAAA YVEEKGKEAA
121 NKAAEFAEGK AGEAKDATK
//