LOCUS AEC10134.1 141 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana cold regulated 15b protein.
ACCESSION CP002685-6498
PROTEIN_ID AEC10134.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="COR15B"
/locus_tag="AT2G42530"
/gene_synonym="cold regulated 15b"
/gene_synonym="F14N22.20"
/gene_synonym="F14N22_20"
/inference="Similar to RNA sequence,
EST:INSD:DR308725.1,INSD:EL192552.1,INSD:DR308735.1,
INSD:DR308724.1,INSD:DR308737.1,INSD:EH851559.1,
INSD:BE038737.1,INSD:AV784526.1,INSD:DR308741.1,
INSD:DR308731.1,INSD:AV789003.1,INSD:EG428875.1,
INSD:DR308730.1,INSD:BX836359.1,INSD:DR308739.1,
INSD:CF651549.1,INSD:CK118260.1,INSD:EG464263.1,
INSD:BP635700.1,INSD:BP631075.1,INSD:DR308728.1,
INSD:EG428873.1,INSD:BP625484.1,INSD:DR308738.1,
INSD:DR308733.1,INSD:DR308723.1,INSD:BP626555.1,
INSD:AV831535.1,INSD:DR308726.1,INSD:AV823537.2,
INSD:DR308729.1,INSD:DR377291.1,INSD:BP624347.1,
INSD:BP785388.1,INSD:BP778073.1,INSD:BP787432.1,
INSD:DR308732.1,INSD:DR308736.1,INSD:CD529845.1,
INSD:DR308727.1,INSD:BP626688.1,INSD:CF651550.1,
INSD:BP781374.1,INSD:DR308734.1,INSD:DR308740.1,
INSD:DR373012.1,INSD:DR308722.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819623.1,INSD:AY045809.1,INSD:AY091440.1,
INSD:BX821600.1,INSD:FJ156734.1,INSD:AY085876.1"
/note="cold regulated 15b (COR15B); INVOLVED IN: response
to cold, defense response to fungus; LOCATED IN:
chloroplast, chloroplast stroma, chloroplast envelope;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
cold-regulated 15a (TAIR:AT2G42540.2); Has 194 Blast hits
to 148 proteins in 43 species: Archae - 0; Bacteria - 18;
Metazoa - 5; Fungi - 6; Plants - 155; Viruses - 0; Other
Eukaryotes - 10 (source: NCBI BLink)."
/db_xref="Araport:AT2G42530"
/db_xref="TAIR:AT2G42530"
intron_pos 66:2 (1/1)
BEGIN
1 MAMSLSGAVL SGMGSSFHNV GAKQSGVGTV RVGRKSELVV VAQRKKSLIY AVKSDGNILD
61 DLNEATKKAS DFVTDKTKEA LADGEKTKDY IVEKTIEANE TATEEAKKAL DYVTEKGKEA
121 GNKAAEFVEG KAEEAKNATK S
//