LOCUS AEC10132.2 407 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana survival motor neuron interacting
protein protein.
ACCESSION CP002685-6492
PROTEIN_ID AEC10132.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G42510"
/gene_synonym="F14N22.22"
/gene_synonym="F14N22_22"
/inference="Similar to RNA sequence,
EST:INSD:EG436639.1,INSD:EG441904.1,INSD:EG441037.1,
INSD:BX837691.1"
/inference="similar to RNA sequence, mRNA:INSD:AY429351.1"
/note="FUNCTIONS IN: molecular_function unknown; INVOLVED
IN: spliceosome assembly, nuclear mRNA splicing, via
spliceosome; LOCATED IN: cellular_component unknown;
CONTAINS InterPro DOMAIN/s: Survival motor neuron
interacting protein 1 (InterPro:IPR007022); BEST
Arabidopsis thaliana protein match is: spliceosome
protein-related (TAIR:AT1G54380.1); Has 229 Blast hits to
211 proteins in 63 species: Archae - 4; Bacteria - 35;
Metazoa - 50; Fungi - 9; Plants - 20; Viruses - 0; Other
Eukaryotes - 111 (source: NCBI BLink)."
/db_xref="Araport:AT2G42510"
/db_xref="TAIR:AT2G42510"
intron_pos 382:2 (1/2)
intron_pos 402:1 (2/2)
BEGIN
1 MATRFDTGES IGSGKTSISR DEFAEDSLKI VSLPPVENDD SVEEMISPKK QVKSSPFTSV
61 FEKDGEIIHS DSIDISFSET TLEETVAMNV ECPGVVVVSV PENGSTILEE NKVGEEIKES
121 SEISTTEGDR LGDDVLKIKD VVETDGFVVS ISDMKESLNS EKKGQDSDGQ RIVEAEKIIL
181 FAEIGDGSTF LEENKELQQI KEVSEISTES DQFGDDVYKI EDDCVGSISD MKEILNSQKK
241 GQDSDVQILW ETEKKNDGDT LARASDIHKI EKNGNGSKDQ REKVERVRVK DNAFVGRSVN
301 IDLVDDTALF DVVPFYKKGK DHSKRPVTAH TDKDAPRKHK KVGVEKPIDK GNASSIVERN
361 ASTKVSDFRN SGEMNGKQLR IILLPELVTE YEGLKNHKSI LGKELMT
//