LOCUS AEC10130.1 532 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana survival motor neuron interacting
protein protein.
ACCESSION CP002685-6490
PROTEIN_ID AEC10130.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G42510"
/gene_synonym="F14N22.22"
/gene_synonym="F14N22_22"
/inference="Similar to RNA sequence,
EST:INSD:EG436639.1,INSD:EG441904.1,INSD:EG441037.1,
INSD:BX837691.1"
/inference="similar to RNA sequence, mRNA:INSD:AY429351.1"
/note="FUNCTIONS IN: molecular_function unknown; INVOLVED
IN: spliceosome assembly, nuclear mRNA splicing, via
spliceosome; LOCATED IN: cellular_component unknown;
CONTAINS InterPro DOMAIN/s: Survival motor neuron
interacting protein 1 (InterPro:IPR007022); BEST
Arabidopsis thaliana protein match is: spliceosome
protein-related (TAIR:AT1G54380.1); Has 358 Blast hits to
335 proteins in 89 species: Archae - 4; Bacteria - 46;
Metazoa - 66; Fungi - 14; Plants - 57; Viruses - 0; Other
Eukaryotes - 171 (source: NCBI BLink)."
/db_xref="Araport:AT2G42510"
/db_xref="TAIR:AT2G42510"
intron_pos 392:2 (1/4)
intron_pos 412:1 (2/4)
intron_pos 459:2 (3/4)
intron_pos 514:1 (4/4)
BEGIN
1 MATRFDTGES IGSGKTSISR DEFAEDSLKI VSLPPVENDD SVEEMISPKK QVKSSPFTSV
61 FEKDGEIIHS DSIDISFSET TLEETVAMNV ECPGVVVVSV PENGSTILEE NKVGEEIKES
121 SEISTTEGDR LGDDVLKIKD VVETDGFVVS ISDMKESLNS EKKGQDSDGQ RIVEAEKIIL
181 FAEIGDGSTF LEENKELQQI KEVSEISTES DQFGDDVYKI EDDCVGSISD MKEILNSQKK
241 GQDSDVQILW ETEKKNDGDT LARASDIHKI EKNGNGSKDQ REKVERVRVK DNAFVGRSVN
301 IDLVDDTALF DVVPFYKKGK DHSKRPVTAH TDKDAPRKHK KVGVEKPIDK GNASSIVERN
361 ASTKVSDFRN SGEMNGKQLR IMYSRNQMES MRLLPELVTE YEGLKNHKSI LEDYVVKEEK
421 TEDNDDYNSI LRPAFAVDGE PDFDSGPPED GIEYLRRVRW EAKRIPNVKV AKVSGSKYRE
481 KEQSVYMPQI PRAPATGEGM GGLVAFRLLT HSSGFKTKWQ RVFRRCTHGD IQ
//