LOCUS AEC10111.1 236 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002685-6461
PROTEIN_ID AEC10111.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G42360"
/gene_synonym="MHK10.8"
/gene_synonym="MHK10_8"
/inference="Similar to RNA sequence,
EST:INSD:EG515753.1,INSD:EG466079.1,INSD:EG515743.1,
INSD:AU226946.1,INSD:EG515740.1,INSD:EG515742.1,
INSD:EG515733.1,INSD:EG515746.1,INSD:EG515751.1,
INSD:EG515732.1,INSD:BP604498.1,INSD:EG515731.1,
INSD:EG515734.1,INSD:AU236128.1,INSD:BP584918.1,
INSD:EH940082.1,INSD:EL071001.1,INSD:EG465988.1,
INSD:EG515750.1,INSD:AU228067.1,INSD:EG515744.1,
INSD:EL288577.1,INSD:DR750636.1,INSD:EL298519.1,
INSD:EG465976.1,INSD:EL010749.1,INSD:DR750634.1,
INSD:AU229722.1,INSD:EG515749.1,INSD:EH865950.1,
INSD:EL263537.1,INSD:EG466046.1,INSD:EH809652.1,
INSD:EH898837.1,INSD:EG515745.1,INSD:EL321609.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY074652.1,INSD:AK228239.1"
/note="RING/U-box superfamily protein; CONTAINS InterPro
DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841),
Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST
Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT2G42350.1); Has 8862 Blast
hits to 8837 proteins in 292 species: Archae - 0; Bacteria
- 0; Metazoa - 2202; Fungi - 673; Plants - 4781; Viruses -
60; Other Eukaryotes - 1146 (source: NCBI BLink)."
/db_xref="Araport:AT2G42360"
/db_xref="TAIR:AT2G42360"
BEGIN
1 MSSNDRDHRR FNSDHHSFWP NPSTYDLNSK IMLAAVASLS GVILIVFALH LYARFVLRRR
61 REAFRGLPVI FRHPFEMPKR GLNPTVIASL PTFTVGATDG VAASATECAV CLSVLKEQDK
121 ARELPNCKHI FHVDCVDTWL TTCSTCPVCR TEVEPRPRLE PEPREGPVGT APQLLVETRL
181 NLTVEAASSS SSDNKTVVSP ASRLNSFRKI LTRERSSNRI NHSCPDQDRV ADLERH
//