LOCUS       AEC10095.1               289 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana RNA-binding (RRM/RBD/RNP motifs)
            family protein protein.
ACCESSION   CP002685-6436
PROTEIN_ID  AEC10095.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G42240"
                     /gene_synonym="T24P15.15"
                     /gene_synonym="T24P15_15"
                     /inference="Similar to RNA sequence,
                     EST:INSD:ES005734.1,INSD:DR229591.1,INSD:ES119679.1,
                     INSD:EG434009.1,INSD:BP820452.1,INSD:AV783255.1,
                     INSD:EG434071.1,INSD:EG434087.1,INSD:EL148005.1,
                     INSD:DR376286.1,INSD:EG434080.1,INSD:EG434072.1,
                     INSD:EG434068.1,INSD:EL244710.1,INSD:ES053239.1,
                     INSD:AJ609378.1,INSD:EG434077.1,INSD:BX838185.1,
                     INSD:EG434079.1,INSD:AU237150.1,INSD:DR229590.1"
                     /inference="similar to RNA sequence, mRNA:INSD:BX821176.1"
                     /note="RNA-binding (RRM/RBD/RNP motifs) family protein;
                     FUNCTIONS IN: nucleotide binding, nucleic acid binding;
                     INVOLVED IN: biological_process unknown; EXPRESSED IN: 21
                     plant structures; EXPRESSED DURING: 13 growth stages;
                     CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1
                     (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait
                     (InterPro:IPR012677); BEST Arabidopsis thaliana protein
                     match is: RNA-binding (RRM/RBD/RNP motifs) family protein
                     (TAIR:AT3G13700.2); Has 30201 Blast hits to 17322 proteins
                     in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
                     17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
                     Eukaryotes - 2996 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G42240"
                     /db_xref="TAIR:AT2G42240"
     intron_pos      89:0 (1/9)
     intron_pos      110:0 (2/9)
     intron_pos      138:1 (3/9)
     intron_pos      157:1 (4/9)
     intron_pos      181:2 (5/9)
     intron_pos      198:0 (6/9)
     intron_pos      227:2 (7/9)
     intron_pos      251:0 (8/9)
     intron_pos      279:2 (9/9)
BEGIN
        1 MDDLEAYYSH YNLPAMVPPP PPGVSPIPIT SAHSVYLPTH VSIGARDEVR TLFVAGLPED
       61 VKPREIYNLF REFPGYETSH LRSSDGAKPF AFAVFSDLQS AVAVMHALNG MVFDLEKHST
      121 LHIDLAKSNP KSKRSRTDDG WESLKKLKSW NTTTESGFGS FQTPGMSSSA YNTIGYSPAQ
      181 SQGIANVAGR APTSRKPSKA ADPCPTLFIA NMGPNCTEAE LIQVFSRCRG FLKLKIQGTY
      241 GTPVAFVDFQ DVSCSSEALH TLQGTVLYSS LTGEVLRLQS RMGMRKKIN
//