LOCUS AEC10092.2 419 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana C-CAP/cofactor C-like domain-containing
protein protein.
ACCESSION CP002685-6434
PROTEIN_ID AEC10092.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G42230"
/gene_synonym="T24P15.14"
/gene_synonym="T24P15_14"
/inference="Similar to RNA sequence,
EST:INSD:EL107484.1,INSD:EL297670.1,INSD:AV547136.1,
INSD:EL252614.1,INSD:EL991563.1,INSD:DR339136.1,
INSD:EH877257.1,INSD:EL276504.1,INSD:EL112212.1,
INSD:AV803316.1,INSD:DR339134.1,INSD:EH897441.1,
INSD:EH954569.1,INSD:ES177665.1,INSD:BP648938.1,
INSD:BP784130.1,INSD:EL062521.1,INSD:EH944361.1,
INSD:BP626132.1,INSD:EL069153.1,INSD:AV441425.1,
INSD:BP663682.1,INSD:EL259049.1,INSD:EH904401.1,
INSD:EH889600.1,INSD:EL092762.1,INSD:EH953344.1,
INSD:EL057892.1,INSD:ES053092.1,INSD:EL275651.1,
INSD:ES094719.1,INSD:AV809560.1,INSD:EH841420.1,
INSD:AV823059.1,INSD:AV792819.1,INSD:EL183560.1,
INSD:BP650760.1,INSD:DR383919.1,INSD:EH931955.1,
INSD:DR210301.1,INSD:BP669812.1,INSD:EH832647.1,
INSD:EH826004.1,INSD:EL305906.1,INSD:EH946681.1,
INSD:EH992595.1,INSD:ES173396.1,INSD:ES099692.1,
INSD:BP789004.1,INSD:DR339135.1,INSD:BP617148.1,
INSD:AV786910.1,INSD:BE525808.1,INSD:ES026175.1,
INSD:EL312454.1"
/inference="similar to RNA sequence, mRNA:INSD:BX819349.1"
/note="C-CAP/cofactor C-like domain-containing protein;
FUNCTIONS IN: binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: CARP motif (InterPro:IPR006599),
C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin
binding cofactor C (InterPro:IPR012945); BEST Arabidopsis
thaliana protein match is: Tubulin binding cofactor C
domain-containing protein (TAIR:AT3G57890.1); Has 35333
Blast hits to 34131 proteins in 2444 species: Archae -
798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants
- 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="Araport:AT2G42230"
/db_xref="TAIR:AT2G42230"
intron_pos 163:0 (1/5)
intron_pos 210:0 (2/5)
intron_pos 337:0 (3/5)
intron_pos 372:0 (4/5)
intron_pos 419:0 (5/5)
BEGIN
1 MTEELIDQSP PPDPDPIQNS NLIIHPRRVP FEHGLLPIQK LVFTDPIQTL APIKQKLASL
61 ATNHRVGSAA ISDALSISDD HARLVLETLS SVLHCETDPL VLAKPEEVDS VGADLRDLIL
121 FLYIQSYKKL LPRTHKDSAS VADVWPSTSA FDGYLSALSP IQLVRSNSRR FMPSPTDEEA
181 HQLSYLQKHI ANIISLLAEP VEGQGDDSLV LSMESLEHIG FLVHYGDKGF DVPSLSQATP
241 FFANSDPDMP AVPVPASQVN DWLLKDIASA LESISNRISG KENGASNASD QNAAMADSSV
301 ALNKVSSNDR GPCIIEGVSK TSLFKQASDL KGRSVKVANC HDSVIYLLAP LRYATVYGCS
361 DSTIVLGAAG KAVKVEHCER VHVIVATKRI CIANCRECVF FLGVNQRPLI VGDNHKLQS
//