LOCUS AEC10081.1 488 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc finger (ubiquitin-hydrolase)
domain-containing protein protein.
ACCESSION CP002685-6414
PROTEIN_ID AEC10081.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="BRIZ1"
/locus_tag="AT2G42160"
/gene_synonym="BRAP2 RING ZnF UBP domain-containing
protein 1"
/gene_synonym="T24P15.7"
/gene_synonym="T24P15_7"
/inference="Similar to RNA sequence,
EST:INSD:EH803697.1,INSD:BP789265.1,INSD:EL993093.1,
INSD:EG443780.1,INSD:EH827100.1,INSD:EL060904.1,
INSD:EL979869.1,INSD:EG443779.1,INSD:AV546347.1,
INSD:EL177417.1,INSD:EG443778.1,INSD:AU230736.1,
INSD:BP847091.1,INSD:EH989488.1,INSD:AU239430.1,
INSD:BP664669.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT004716.1,INSD:AK118562.1,INSD:BX820719.1,
INSD:BX820379.1"
/note="BRAP2 RING ZnF UBP domain-containing protein 1
(BRIZ1); FUNCTIONS IN: catalytic activity, zinc ion
binding; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
BRCA1-associated 2 (InterPro:IPR011422), Zinc finger,
UBP-type (InterPro:IPR001607), Zinc finger, RING-type
(InterPro:IPR001841); BEST Arabidopsis thaliana protein
match is: zinc finger (C3HC4-type RING finger) family
protein (TAIR:AT2G26000.2); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G42160"
/db_xref="TAIR:AT2G42160"
intron_pos 104:2 (1/10)
intron_pos 141:0 (2/10)
intron_pos 179:1 (3/10)
intron_pos 212:0 (4/10)
intron_pos 247:2 (5/10)
intron_pos 331:0 (6/10)
intron_pos 349:0 (7/10)
intron_pos 397:0 (8/10)
intron_pos 418:2 (9/10)
intron_pos 437:0 (10/10)
BEGIN
1 MFILRVHSVD SERPISVEEE ESGFTYASKR AQPPLKLIQP SLKLTDRKGL IHLYRKSSHS
61 SLPNPSSRST TLFIVAVPNY LSSLDFIRFC DSRISQVSDI LFIRNDGMED RYSVLITFSD
121 QSEADGFYNN LNGKKFAPSE AEVCHILYVM SVEHTEFDEV AAEAPTGFTE LPTCPICLER
181 LDPDTSGIVS TLCDHSFQCS CTSKWTYLSC QVCRLCQQQD EILNCSICGK TENVWACLVC
241 GFVGCGRYKE GHSIRHWKET HHCYSLDLRT QQIWDYVGDS YVHRLNHSKI DGKSVEMSTS
301 CLSHQGDCGL CECSEDTGIS GAIFNSKVDS IVIEYNDLLA SQLKGQRQYY ESLIVEARSK
361 QESSIAEAVE QIVVNTMQEL QNKIEKCEEE KSGITEVNTK LIKEQDTWRK KAKEIEEREA
421 ALLGSKDEMI TDLQEQIRDI TVFIEAKKTL KKMSSDTDGI REGTVLPVPI SPEPVSSVRR
481 QKKSNRRK
//