LOCUS AEC10080.1 631 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA-binding bromodomain-containing
protein protein.
ACCESSION CP002685-6413
PROTEIN_ID AEC10080.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G42150"
/gene_synonym="T24P15.6"
/gene_synonym="T24P15_6"
/inference="Similar to RNA sequence,
EST:INSD:DR285708.1,INSD:BP789265.1,INSD:EG443780.1,
INSD:EG443788.1,INSD:EG443783.1,INSD:EG443773.1,
INSD:EG443779.1,INSD:EG443795.1,INSD:EG443789.1,
INSD:DR380400.1,INSD:EG443785.1,INSD:EG443800.1,
INSD:EG443781.1,INSD:EG443797.1,INSD:EG443778.1,
INSD:EG443794.1,INSD:EG443784.1,INSD:EG443790.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819148.1,INSD:AY461606.1"
/note="DNA-binding bromodomain-containing protein;
FUNCTIONS IN: DNA binding; LOCATED IN: nucleus; EXPRESSED
IN: 12 plant structures; EXPRESSED DURING: LP.04 four
leaves visible, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; CONTAINS InterPro DOMAIN/s:
SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding
(InterPro:IPR014778), Bromodomain (InterPro:IPR001487);
BEST Arabidopsis thaliana protein match is: DNA-binding
bromodomain-containing protein (TAIR:AT3G57980.1); Has
2988 Blast hits to 2572 proteins in 258 species: Archae -
0; Bacteria - 77; Metazoa - 1744; Fungi - 298; Plants -
259; Viruses - 10; Other Eukaryotes - 600 (source: NCBI
BLink)."
/db_xref="Araport:AT2G42150"
/db_xref="TAIR:AT2G42150"
intron_pos 300:0 (1/1)
BEGIN
1 MAKPENDVTL TEKQTWSTWE ELLLACAVHR HGTESWNSVS AEIQKLSPNL CSLTASACRH
61 KYFDLKSRFT QELPVPESVA EISTAPWLEE LRKLRVDELR REVEQYDLSI STLQSKVKQL
121 EEEREMSFIK PDTETENLDL ERKKERSDSG EPVPNPPVQL MNETISPDPK EIGSENTERE
181 EEMAGSGGGE SKLAGEDSCR GSCESVEKEP TTNSERVEPV SVTELIESED GASRGEEITS
241 DVQSSASLPR KGTSEPDKED QSPTSAKDFT VESQPLISFV EILLSHPCGS HFSRRLERQE
301 TIEYGTIIRE HVDFEIIRKR VEGGLYKSWR INFFRDLLLL VNNARVFYHR GSSEFKFAEQ
361 LHQLVKKQMT TTLKGLSNRD EISISPPKEE VVAIPSSKPV SSKPRMSVPN IVACRKRSAL
421 AAKPLLLLPP GPDKKAKKTD HVVDYDEKPV SDKDGEASGK DDDDSLIVKI MTRGRTSSTG
481 KVANRNDKNR DSSLNVDDSK DKVKKTDEEK KGGSKKKRAA SFLRRMKVGS SDDTLKRSSA
541 ADSSTTGKGG GAEQRKNNSN KADNKKTPIP KIRQTNKKAS PVKRSNNGRN SEREAAPSSS
601 SYPILAKRSR DAGEKEEASS YSPRLKKRAR R
//