LOCUS AEC10073.1 441 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA polymerase delta small subunit protein.
ACCESSION CP002685-6406
PROTEIN_ID AEC10073.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="POLD2"
/locus_tag="AT2G42120"
/gene_synonym="DNA polymerase delta small subunit"
/gene_synonym="T24P15.3"
/gene_synonym="T24P15_3"
/inference="Similar to RNA sequence,
EST:INSD:AV558274.1,INSD:ES208593.1,INSD:AV805758.1,
INSD:ES099059.1,INSD:EL201554.1,INSD:ES081362.1,
INSD:ES178707.1,INSD:EH858208.1,INSD:ES010308.1,
INSD:EL995404.1,INSD:ES063430.1,INSD:EL337985.1,
INSD:EL983111.1,INSD:EL224385.1,INSD:DR354080.1,
INSD:EH805815.1,INSD:EL196523.1"
/inference="similar to RNA sequence, mRNA:INSD:BX820805.1"
/note="DNA polymerase delta small subunit (POLD2);
FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase
activity; INVOLVED IN: DNA replication; EXPRESSED IN: 18
plant structures; EXPRESSED DURING: 7 growth stages;
CONTAINS InterPro DOMAIN/s: DNA polymerase alpha/epsilon,
subunit B (InterPro:IPR007185); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G42120"
/db_xref="TAIR:AT2G42120"
intron_pos 20:0 (1/13)
intron_pos 64:1 (2/13)
intron_pos 100:0 (3/13)
intron_pos 142:1 (4/13)
intron_pos 178:1 (5/13)
intron_pos 217:0 (6/13)
intron_pos 245:0 (7/13)
intron_pos 268:0 (8/13)
intron_pos 292:0 (9/13)
intron_pos 322:2 (10/13)
intron_pos 365:1 (11/13)
intron_pos 399:1 (12/13)
intron_pos 422:0 (13/13)
BEGIN
1 MEIDSEKIHE RKQSDYNSLQ DERFEIQKEM YRGQQYSQIY FARLHLMRTL LYSLAPTWKS
61 HLPVCKVLGL EKGKECIIVG TLFKHMKLKP CVLDEYSKER SVTPLVKPHN FMHPDDNLIL
121 EDESGRVKLA GSALSPAIYV TGVVVALHGK ETNAGEFFVE DVLEAGLPPQ IERPIDLQED
181 KYVVLLSGLC IGSKSANPLQ FQLLVDHITG HLGDEEEQGL AAQIVHVVIA GNSFEFPRKL
241 INGQNLASKD QSTLYEPIKE LDIMLSQIAA GVSVDIMPGT NDPANFALPQ QPLNRCLFPG
301 SSPYNTFRSC TNPHSFDVDN IRFLGTSGQN IDDLGKYSEA KSKLDFVERT LRWRHLAPTA
361 PNTLGCYPFT DRDPFLIETC PHVYFVGNQD KYDNRLIKGS EGQLVRLICI PKFCETGIAV
421 AVNLRNLECH TLSFSTQINQ S
//