LOCUS AEC10063.1 1083 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana phospholipase D beta 1 protein.
ACCESSION CP002685-6393
PROTEIN_ID AEC10063.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="PLDBETA1"
/locus_tag="AT2G42010"
/gene_synonym="PHOSPHOLIPASE D"
/gene_synonym="phospholipase D beta 1"
/gene_synonym="PLDBETA"
/gene_synonym="T6D20.10"
/gene_synonym="T6D20_10"
/inference="Similar to RNA sequence,
EST:INSD:ES141992.1,INSD:EL219294.1,INSD:EL033733.1,
INSD:EL263186.1,INSD:BP618943.1,INSD:BP605207.1,
INSD:EL325061.1,INSD:ES047965.1,INSD:EL139306.1,
INSD:BP618358.1,INSD:ES197651.1,INSD:EL013116.1,
INSD:AU237366.1,INSD:AW004537.1,INSD:AI999249.1,
INSD:BP599700.1,INSD:CA794208.1,INSD:EL230789.1,
INSD:EH952168.1,INSD:Z30735.1,INSD:AU228410.1,
INSD:BP611158.1,INSD:EL054679.1,INSD:Z30736.1,
INSD:AV555459.1,INSD:EH886636.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX821609.1,INSD:U84568.2"
/note="phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN:
phospholipase D activity, protein binding,
phosphatidylinositol-4,5-bisphosphate binding; INVOLVED
IN: response to cadmium ion, defense response to
bacterium, incompatible interaction; EXPRESSED IN: 19
plant structures; EXPRESSED DURING: 10 growth stages;
CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein
(InterPro:IPR018029), Phospholipase D
(InterPro:IPR015679), C2 calcium/lipid-binding domain,
CaLB (InterPro:IPR008973), Phospholipase
D/Transphosphatidylase (InterPro:IPR001736), C2
calcium-dependent membrane targeting (InterPro:IPR000008);
BEST Arabidopsis thaliana protein match is: phospholipase
D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253
proteins in 1246 species: Archae - 34; Bacteria - 3967;
Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses -
972; Other Eukaryotes - 4758 (source: NCBI BLink)."
/db_xref="Araport:AT2G42010"
/db_xref="TAIR:AT2G42010"
intron_pos 553:0 (1/9)
intron_pos 592:0 (2/9)
intron_pos 657:0 (3/9)
intron_pos 740:0 (4/9)
intron_pos 763:0 (5/9)
intron_pos 812:1 (6/9)
intron_pos 862:0 (7/9)
intron_pos 921:0 (8/9)
intron_pos 987:0 (9/9)
BEGIN
1 MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA
61 SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF DYQPSPYPYQ PQGNFGAYGP
121 PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP
181 PVDELLGGLH ISTNQPGPSV PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS
241 SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
301 RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF
361 VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG KPCKPGANLS LSIQYTPMDK
421 LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW
481 HDMFDAIRQA RRLIYITGWS VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD
541 DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
601 QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS
661 GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK KFKTSYDDAL LRIDRIPDIL
721 GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY
781 VKAIRAAQHF IYIENQYFIG SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV
841 IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
901 MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT
961 RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA TLDDCFTQPE SIECVRKVRT
1021 MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN
1081 LTI
//