LOCUS AEC10023.1 458 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Integrase-type DNA-binding superfamily
protein protein.
ACCESSION CP002685-6341
PROTEIN_ID AEC10023.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G41710"
/gene_synonym="T11A7.19"
/gene_synonym="T11A7_19"
/note="Integrase-type DNA-binding superfamily protein;
FUNCTIONS IN: DNA binding, sequence-specific DNA binding
transcription factor activity; INVOLVED IN: regulation of
transcription, DNA-dependent; LOCATED IN: nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding,
integrase-type (InterPro:IPR016177), Pathogenesis-related
transcriptional factor/ERF, DNA-binding
(InterPro:IPR001471); BEST Arabidopsis thaliana protein
match is: Integrase-type DNA-binding superfamily protein
(TAIR:AT3G54320.1)."
/db_xref="Araport:AT2G41710"
/db_xref="TAIR:AT2G41710"
intron_pos 76:2 (1/10)
intron_pos 101:1 (2/10)
intron_pos 111:2 (3/10)
intron_pos 139:1 (4/10)
intron_pos 142:1 (5/10)
intron_pos 172:0 (6/10)
intron_pos 196:2 (7/10)
intron_pos 213:2 (8/10)
intron_pos 234:1 (9/10)
intron_pos 441:0 (10/10)
BEGIN
1 MASVSSSDQG PKTEAGCSGG GGGESSETVA ASDQMLLYRG FKKAKKERGC TAKERISKMP
61 PCTAGKRSSI YRGVTRFGCE LGVVLSVLEY GMFGLVDMHF VSRLKLEEMS RHRWTGRYEA
121 HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA ARAYDLAALK YWGPGTLINF PVTDYTRDLE
181 EMQNLSREEY LASLRRKSSG FSRGIAKYRG LQSRWDASAS RMPGPEYFSN IHYGAGDDRG
241 TEGDFLGSFC LERKIDLTGY IKWWGANKNR QPESSSKASE DANVEDAGTE LKTLEHTSHA
301 TEPYKAPNLG VLCGTQRKEK EISSPSSSSA LSILSQSPAF KSLEEKVLKI QESCNNENDE
361 NANRNIINME KNNGKAIEKP VVSHGVALGG AAALSLQKSM YPLTSLLTAP LLTNYNTLDP
421 LADPILWTPF LPSGSSLTSE VTKTETSCST YSYLPQEK
//