LOCUS AEC09998.1 462 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 6-phosphogluconate dehydrogenase
family protein protein.
ACCESSION CP002685-6306
PROTEIN_ID AEC09998.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="GPDHC1"
/locus_tag="AT2G41540"
/gene_synonym="T32G6.6"
/gene_synonym="T32G6_6"
/inference="Similar to RNA sequence,
EST:INSD:EL240511.1,INSD:EL117817.1,INSD:EH963448.1,
INSD:AV531060.1,INSD:EH976099.1,INSD:CD531390.1,
INSD:ES024414.1,INSD:ES086267.1,INSD:BE527460.1,
INSD:AV788889.1,INSD:CB254985.1,INSD:BP853178.1,
INSD:BP854854.1,INSD:BE520444.1,INSD:EH918615.1,
INSD:DR372097.1,INSD:EL111812.1,INSD:BE520446.1,
INSD:DR239347.1,INSD:EH868105.1,INSD:ES024721.1,
INSD:DR239345.1,INSD:EL986442.1,INSD:CA781763.1,
INSD:AV533976.1,INSD:BP654008.1,INSD:DR380267.1,
INSD:ES143350.1,INSD:BP667074.1,INSD:BE520445.1,
INSD:DR290361.1,INSD:BP641452.1,INSD:DR379084.1,
INSD:BP613188.1"
/inference="similar to RNA sequence, mRNA:INSD:AY091247.1"
/note="GPDHC1; CONTAINS InterPro DOMAIN/s:
6-phosphogluconate dehydrogenase, C-terminal-like
(InterPro:IPR008927), Dehydrogenase, multihelical
(InterPro:IPR013328), NAD(P)-binding domain
(InterPro:IPR016040), NAD-dependent glycerol-3-phosphate
dehydrogenase, C-terminal (InterPro:IPR006109),
NAD-dependent glycerol-3-phosphate dehydrogenase,
N-terminal (InterPro:IPR011128), NAD-dependent
glycerol-3-phosphate dehydrogenase (InterPro:IPR006168);
BEST Arabidopsis thaliana protein match is:
6-phosphogluconate dehydrogenase family protein
(TAIR:AT3G07690.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G41540"
/db_xref="TAIR:AT2G41540"
intron_pos 219:1 (1/4)
intron_pos 293:1 (2/4)
intron_pos 376:0 (3/4)
intron_pos 422:2 (4/4)
BEGIN
1 MVGSIEAKSL QSNGSVHHIG LNLEEKLDEF RRLLGKSEKD PLRIVSVGAG AWGSVFAALL
61 QESYGGFRDK FQIRIWRRAG RAVDRETAEH LFEVINSRED ILRRLIRRCA YLKYVEARLG
121 DRTLYADEIL KDGFCLNMVD TPLCPLKVVT NLQEAVWDAD IVVNGLPSTE TREVFEEISK
181 YWKERITVPI IISLSKGIET ALEPVPHIIT PTKMIHQATG VPIDNVLYLG GPNIAAEIYN
241 KEYANARICG AAKWRKPLAK FLRQPHFIVW DNSDLVTHEV MGGLKNVYAI GAGMVAALTN
301 ESATSKSVYF AHCTSEMIFI THLLAEEPEK LAGPLLADTY VTLLKGRNAW YGQMLAKGEI
361 NRDMGDSISG KGMIQGVSAV GAFYQLLSQS SLSILPSEEK KPVAPVESCP ILKTLYKILI
421 TREQSTQAIL QALRDETLND PRDRIEIAQS HAFYRPSLLG QP
//