LOCUS AEC09985.1 403 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana apurinic endonuclease-redox protein protein.
ACCESSION CP002685-6282
PROTEIN_ID AEC09985.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="ARP"
/locus_tag="AT2G41460"
/gene_synonym="apurinic endonuclease-redox protein"
/gene_synonym="T26J13.5"
/gene_synonym="T26J13_5"
/inference="Similar to RNA sequence,
EST:INSD:AI994447.1,INSD:BE530237.1,INSD:ES166828.1,
INSD:ES066887.1,INSD:BX836894.1,INSD:EG515723.1,
INSD:T43976.1,INSD:BX837750.1,INSD:ES076628.1"
/note="apurinic endonuclease-redox protein (ARP); CONTAINS
InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034),
AP endonuclease, family 1, binding site
(InterPro:IPR020847), Exodeoxyribonuclease III xth
(InterPro:IPR004808), Endonuclease/exonuclease/phosphatase
(InterPro:IPR005135); BEST Arabidopsis thaliana protein
match is: C2 calcium/lipid-binding
endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink)."
/db_xref="Araport:AT2G41460"
/db_xref="TAIR:AT2G41460"
intron_pos 18:2 (1/7)
intron_pos 79:0 (2/7)
intron_pos 110:2 (3/7)
intron_pos 137:1 (4/7)
intron_pos 210:1 (5/7)
intron_pos 318:0 (6/7)
intron_pos 355:0 (7/7)
BEGIN
1 MNNVLQFGLQ SSAIYVAKFL VVPLRSLRVG SSFVGVGVGT RSFNKRLMSN ATAFSINNSK
61 RKELKIPGAA IDQNCHQMGS DTDRDEMGTL QDDRKEIEAM TVQELRSTLR KLGVPVKGRK
121 QELISTLRLH MDSNLPDQKE TSSSTRSDSV TIKRKISNRE EPTEDECTNS EAYDIEHGEK
181 RVKQSTEKNL KAKVSAKAIA KEQKSLMRTG KQQIQSKEET SSTISSELLK TEEIISSPSQ
241 SEPWTVLAHK KPQKDWKAYN PKTMRPPPLP EGTKCVKVMT WNVNGLRGLL KFESFSALQL
301 AQRENFDILC LQETKLQVKD VEEIKKTLID GYDHSFWSCS VSKLGYSGTA IISRIKPLSV
361 RYGTGLSGHD TEGRIVTAEF DSFYLINTYV PNSGDGLKRL VLK
//