LOCUS AEC09953.1 290 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Haloacid dehalogenase-like hydrolase
(HAD) superfamily protein protein.
ACCESSION CP002685-6239
PROTEIN_ID AEC09953.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G41250"
/gene_synonym="F13H10.20"
/gene_synonym="F13H10_20"
/inference="Similar to RNA sequence,
EST:INSD:EL220134.1,INSD:EL179924.1,INSD:EL288875.1,
INSD:EH808191.1,INSD:EG524212.1,INSD:EH942493.1,
INSD:EL073491.1,INSD:BP860280.1,INSD:EH904358.1,
INSD:BP635515.1,INSD:EL266265.1,INSD:EL274725.1,
INSD:ES076842.1,INSD:EH831793.1,INSD:EL044929.1,
INSD:EL105344.1,INSD:EH815034.1,INSD:DR231399.1,
INSD:AV829949.1,INSD:EL320408.1,INSD:DR354266.1,
INSD:AI999138.1,INSD:AV831686.1,INSD:AV809354.1,
INSD:EH910063.1,INSD:EG524210.1,INSD:EL043804.1,
INSD:EH907551.1,INSD:EL340432.1,INSD:EL080216.1,
INSD:BP789943.1,INSD:ES183790.1,INSD:BP589087.1,
INSD:EH922809.1,INSD:EL057042.1,INSD:EH986695.1,
INSD:BP787456.1,INSD:EL206011.1,INSD:EL099904.1,
INSD:EL307544.1,INSD:ES038180.1,INSD:EL027534.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY070081.1,INSD:AK227199.1,INSD:AY133731.1"
/note="Haloacid dehalogenase-like hydrolase (HAD)
superfamily protein; FUNCTIONS IN: hydrolase activity,
catalytic activity, phosphoglycolate phosphatase activity;
INVOLVED IN: metabolic process; LOCATED IN: mitochondrion;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Haloacid
dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid
dehydrogenase/epoxide hydrolase (InterPro:IPR005833),
HAD-superfamily hydrolase, subfamily IA, REG-2-like
(InterPro:IPR011949), HAD-superfamily hydrolase, subfamily
IA, variant 1 (InterPro:IPR006439); BEST Arabidopsis
thaliana protein match is: Haloacid dehalogenase-like
hydrolase (HAD) superfamily protein (TAIR:AT1G14310.1);
Has 5345 Blast hits to 5345 proteins in 1611 species:
Archae - 258; Bacteria - 4323; Metazoa - 249; Fungi - 67;
Plants - 142; Viruses - 0; Other Eukaryotes - 306 (source:
NCBI BLink)."
/db_xref="Araport:AT2G41250"
/db_xref="TAIR:AT2G41250"
intron_pos 98:0 (1/5)
intron_pos 133:2 (2/5)
intron_pos 170:0 (3/5)
intron_pos 224:0 (4/5)
intron_pos 282:0 (5/5)
BEGIN
1 MALRIRKATT TLLFSGGITH GTDRIARTGA LLSRWISSAS SSSAVVADDE SSGIYGLGSV
61 LKEYEDYRRS LYGEITHKAL LVDAVGTLLV PAQPTAQIYK NIGEKYGVEY SEAEILTRYR
121 RAYQKPWGGS HLRYVNDARP FWQYIVTAST GCSDSQYFEE LYSYFTTEQA WKLCDPDAGK
181 VFKAIKEAGV KVAIVSNFDT RLRPLLRALR CEDWFDAVAV SAEVEAEKPN PTIFLKACEL
241 LEVNPEDAVH VGDDRRNDVW GARDAGCDAW LWGSEVTSFK QVAQRIGVKV
//