LOCUS AEC09952.1 241 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana basic helix-loop-helix protein 100 protein.
ACCESSION CP002685-6237
PROTEIN_ID AEC09952.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="BHLH100"
/locus_tag="AT2G41240"
/gene_synonym="basic helix-loop-helix protein 100"
/gene_synonym="F13H10.21"
/gene_synonym="F13H10_21"
/inference="similar to RNA sequence, mRNA:INSD:AF488626.1"
/note="basic helix-loop-helix protein 100 (BHLH100);
FUNCTIONS IN: DNA binding, sequence-specific DNA binding
transcription factor activity; INVOLVED IN: response to
water deprivation, regulation of transcription; LOCATED
IN: nucleus; CONTAINS InterPro DOMAIN/s: Achaete-scute
transcription factor related (InterPro:IPR015660),
Helix-loop-helix DNA-binding domain (InterPro:IPR001092),
Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST
Arabidopsis thaliana protein match is: basic
helix-loop-helix (bHLH) DNA-binding superfamily protein
(TAIR:AT3G56970.1); Has 850 Blast hits to 850 proteins in
99 species: Archae - 0; Bacteria - 2; Metazoa - 130; Fungi
- 33; Plants - 678; Viruses - 0; Other Eukaryotes - 7
(source: NCBI BLink)."
/db_xref="Araport:AT2G41240"
/db_xref="TAIR:AT2G41240"
intron_pos 95:0 (1/1)
BEGIN
1 MCALVPPLYP NFGWPCGDHS FYETDDVSNT FLDFPLPDLT VTHENVSSEN NRTLLDNPVV
61 MKKLNHNASE RERRKKINTM FSSLRSCLPP TNQTKLSVSA TVSQALKYIP ELQEQVKKLM
121 KKKEELSFQI SGQRDLVYTD QNSKSEEGVT SYASTVSSTR LSETEVMVQI SSLQTEKCSF
181 GNVLSGVEED GLVLVGASSS RSHGERLFYS MHLQIKNGQV NSEELGDRLL YLYEKCGHSF
241 T
//