LOCUS       AEC09941.1               141 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana VQ motif-containing protein protein.
ACCESSION   CP002685-6227
PROTEIN_ID  AEC09941.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="SIB2"
                     /locus_tag="AT2G41180"
                     /gene_synonym="sigma factor binding protein 2"
                     /gene_synonym="T3K9.5"
                     /gene_synonym="T3K9_5"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EH854277.1,INSD:AV829703.1,INSD:EL010624.1,
                     INSD:EL016708.1,INSD:EH882507.1,INSD:EL259131.1,
                     INSD:EL337800.1,INSD:DR237209.1,INSD:EH868163.1,
                     INSD:EL204613.1,INSD:EH952291.1,INSD:EL267364.1,
                     INSD:EL300793.1,INSD:EL275509.1,INSD:EL309909.1,
                     INSD:DR381072.1,INSD:EL059057.1,INSD:EL301764.1,
                     INSD:EL223942.1,INSD:EH853578.1,INSD:AA042283.1,
                     INSD:AV814002.1,INSD:AI992550.1,INSD:AV807468.1,
                     INSD:EL320841.1,INSD:CB253590.1,INSD:EH871630.1,
                     INSD:EH835936.1,INSD:CB254555.1,INSD:AV830947.1,
                     INSD:EL039558.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BT000291.1,INSD:AY099785.1,INSD:AY057686.1"
                     /note="VQ motif-containing protein; FUNCTIONS IN:
                     molecular_function unknown; INVOLVED IN:
                     biological_process unknown; LOCATED IN: chloroplast;
                     EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
                     growth stages; CONTAINS InterPro DOMAIN/s: VQ
                     (InterPro:IPR008889); BEST Arabidopsis thaliana protein
                     match is: sigma factor binding protein 1
                     (TAIR:AT3G56710.1); Has 49 Blast hits to 49 proteins in 11
                     species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
                     Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
                     NCBI BLink)."
                     /db_xref="Araport:AT2G41180"
                     /db_xref="TAIR:AT2G41180"
BEGIN
        1 MDQSSSTLLI NQRKSSSSPT RIPPKQKRKS TTTHKPIKVR YISNPMRVET CPSKFRELVQ
       61 ELTGQDAADL PPSPTTFTAV DLHRPCESEM NLEPLDGEVR GEYYSPLDEE VFNAPQMSAG
      121 LSGFFSSGFY NVNALGSIGS L
//