LOCUS AEC09929.1 199 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Calcium-binding EF hand family protein
protein.
ACCESSION CP002685-6214
PROTEIN_ID AEC09929.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="TCH3"
/locus_tag="AT2G41100"
/gene_synonym="ARABIDOPSIS THALIANA CALMODULIN LIKE 4"
/gene_synonym="ATCAL4"
/gene_synonym="calmodulin-like 12"
/gene_synonym="CALMODULIN-RELATED PROTEIN"
/gene_synonym="CML12"
/gene_synonym="T3K9.13"
/gene_synonym="T3K9_13"
/gene_synonym="TOUCH 3"
/inference="Similar to RNA sequence,
EST:INSD:EL049842.1,INSD:AV536907.1,INSD:EH850241.1,
INSD:EG503835.1,INSD:BP648217.1,INSD:BP663778.1,
INSD:EH905137.1,INSD:EL095489.1,INSD:EL090448.1,
INSD:BP629804.1,INSD:EH989492.1,INSD:EL255141.1,
INSD:EH969955.1,INSD:EH976571.1,INSD:BP664951.1,
INSD:BP669391.1,INSD:EL073080.1,INSD:EL103156.1,
INSD:BP602327.1,INSD:BP600256.1,INSD:EH924745.1,
INSD:CB074261.1,INSD:EH883792.1,INSD:EH976955.1,
INSD:EL248095.1,INSD:BP616606.1,INSD:EL115715.1,
INSD:EL114823.1,INSD:EH851831.1,INSD:BP662710.1,
INSD:EL159965.1,INSD:BP634776.1,INSD:EL045411.1,
INSD:BP589924.1,INSD:N38224.1,INSD:BP662397.1,
INSD:BP668614.1,INSD:BP665163.1,INSD:EL311978.1,
INSD:EL069019.1,INSD:BP594065.1,INSD:AV808106.1,
INSD:EH813014.1,INSD:EL205478.1,INSD:CD531207.1,
INSD:EH960976.1,INSD:BP629949.1,INSD:BE662892.1,
INSD:BP663541.1,INSD:BP634980.1,INSD:BP588350.1,
INSD:EH890132.1,INSD:EH981621.1,INSD:EH956627.1,
INSD:EL125779.1,INSD:EL225608.1,INSD:EL055430.1,
INSD:EL287077.1,INSD:EL048405.1,INSD:EL266566.1,
INSD:EL304607.1,INSD:AV812972.1,INSD:EL034246.1,
INSD:EL271030.1,INSD:EL098558.1,INSD:BP625399.1,
INSD:EL207102.1,INSD:EL147623.1,INSD:BP654468.1,
INSD:EL243338.1,INSD:EH874159.1,INSD:EL305807.1,
INSD:EG486605.1,INSD:BP785647.1,INSD:EH975663.1,
INSD:EL217454.1,INSD:BP649819.1,INSD:EH875106.1,
INSD:EL155143.1,INSD:EH983113.1,INSD:AV802950.1,
INSD:EH954325.1,INSD:EL277144.1,INSD:EL309010.1,
INSD:BP629975.1,INSD:EL195541.1,INSD:EH846752.1,
INSD:EL075655.1,INSD:AV536988.1,INSD:EL252422.1,
INSD:BP596335.1,INSD:BP666052.1,INSD:BP625098.1,
INSD:N97207.1,INSD:EL226943.1,INSD:BP630845.1,
INSD:EH956213.1,INSD:BE662975.1,INSD:EL273697.1,
INSD:BP617527.1,INSD:EL057311.1,INSD:BP669768.1,
INSD:AV811136.1,INSD:AV787877.1,INSD:AV814770.1,
INSD:AV814074.1,INSD:EL057432.1,INSD:EH985600.1,
INSD:BP667365.1,INSD:EL314520.1,INSD:BP786675.1,
INSD:BP659640.1,INSD:BP609238.1,INSD:BP603860.1,
INSD:EH952102.1,INSD:EL203898.1,INSD:BP670197.1,
INSD:EL039944.1,INSD:BP654012.1,INSD:AV804987.1,
INSD:BP670109.1,INSD:EH936684.1,INSD:EL310563.1,
INSD:BP668173.1,INSD:BP666449.1,INSD:BP632605.1,
INSD:AV783672.1,INSD:EG439165.1,INSD:EH987317.1,
INSD:EH865450.1,INSD:EL257668.1,INSD:BP665853.1,
INSD:BP634952.1,INSD:EL235995.1,INSD:EH880284.1,
INSD:BP641088.1,INSD:EL158340.1,INSD:EL155806.1,
INSD:BP668785.1,INSD:EH833782.1,INSD:EG505187.1,
INSD:EL178717.1,INSD:EL045230.1,INSD:EL285229.1,
INSD:BP593411.1,INSD:EL099874.1,INSD:EL191858.1,
INSD:BP620231.1,INSD:EL154113.1,INSD:EL236704.1,
INSD:EL283168.1,INSD:EH989672.1,INSD:EL095008.1,
INSD:EL072982.1,INSD:BP595919.1,INSD:BP784794.1,
INSD:BP663426.1,INSD:EH856142.1,INSD:EL095848.1,
INSD:AV544165.1"
/inference="similar to RNA sequence, mRNA:INSD:BT011896.1"
/note="TOUCH 3 (TCH3); FUNCTIONS IN: calcium ion binding;
INVOLVED IN: response to mechanical stimulus, response to
temperature stimulus, thigmotropism, response to absence
of light; LOCATED IN: plasma membrane; EXPRESSED IN: 26
plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding
site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249),
EF-hand-like domain (InterPro:IPR011992), Calcium-binding
EF-hand (InterPro:IPR002048), EF-hand
(InterPro:IPR018248); BEST Arabidopsis thaliana protein
match is: calmodulin 5 (TAIR:AT2G27030.2); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="Araport:AT2G41100"
/db_xref="TAIR:AT2G41100"
intron_pos 80:1 (1/1)
BEGIN
1 MFSLGKNRTK ADLQDMMNEV DLDGDGTIDF PEFLYLMAKN QGHDQAPRHT KKTMVDYQLT
61 DDQILEFREA FRVFDKNGDG YITVNELRTT MRSLGETQTK AELQDMINEA DADGDGTISF
121 SEFVCVMTGK MIDTQSKKET YRVVNQGQGQ VQRHTRNDRA GGTNWERDIA VGVASNIIAS
181 PISDFMKDRF KDLFEALLS
//