LOCUS AEC09928.1 324 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Calcium-binding EF hand family protein
protein.
ACCESSION CP002685-6207
PROTEIN_ID AEC09928.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="TCH3"
/locus_tag="AT2G41100"
/gene_synonym="ARABIDOPSIS THALIANA CALMODULIN LIKE 4"
/gene_synonym="ATCAL4"
/gene_synonym="calmodulin-like 12"
/gene_synonym="CALMODULIN-RELATED PROTEIN"
/gene_synonym="CML12"
/gene_synonym="T3K9.13"
/gene_synonym="T3K9_13"
/gene_synonym="TOUCH 3"
/inference="Similar to RNA sequence,
EST:INSD:EL049842.1,INSD:EH850241.1,INSD:EL176598.1,
INSD:BP648217.1,INSD:EL090448.1,INSD:BP629804.1,
INSD:EL172216.1,INSD:EH969955.1,INSD:EH976571.1,
INSD:BP664951.1,INSD:EL147912.1,INSD:EL152893.1,
INSD:EL103156.1,INSD:BP858040.1,INSD:EL154201.1,
INSD:BP602327.1,INSD:BP600256.1,INSD:EH924745.1,
INSD:EG501184.1,INSD:EH883792.1,INSD:EH976955.1,
INSD:EL156472.1,INSD:BP616606.1,INSD:DN604777.1,
INSD:BP856209.1,INSD:EH851831.1,INSD:EH949095.1,
INSD:EL159965.1,INSD:EL230684.1,INSD:BP859009.1,
INSD:BP589924.1,INSD:BP865551.1,INSD:BP668614.1,
INSD:BP665163.1,INSD:EL311978.1,INSD:EL069019.1,
INSD:BP594065.1,INSD:EL103364.1,INSD:EH813014.1,
INSD:AV808106.1,INSD:BP850143.2,INSD:EH960976.1,
INSD:BP804899.1,INSD:BP663541.1,INSD:EH890132.1,
INSD:BP588350.1,INSD:EL125779.1,INSD:EL225608.1,
INSD:BP833999.1,INSD:EL304607.1,INSD:BP858636.1,
INSD:AV812972.1,INSD:BP844318.1,INSD:EL034246.1,
INSD:BP849741.1,INSD:BP625399.1,INSD:EH874159.1,
INSD:EL305807.1,INSD:EH943971.1,INSD:BP785647.1,
INSD:EH975663.1,INSD:EH976413.1,INSD:EG520110.1,
INSD:BP862709.1,INSD:EL155143.1,INSD:AV802950.1,
INSD:EH954325.1,INSD:EL277144.1,INSD:BP852715.1,
INSD:EL075655.1,INSD:AV536988.1,INSD:AV830774.1,
INSD:BP866461.1,INSD:N97207.1,INSD:BP625098.1,
INSD:BP845002.1,INSD:EL273697.1,INSD:EH881965.1,
INSD:AV811136.1,INSD:BP842365.1,INSD:AV814770.1,
INSD:EH985600.1,INSD:BP786675.1,INSD:BP659640.1,
INSD:AV552641.1,INSD:EH952102.1,INSD:BP603860.1,
INSD:BP609238.1,INSD:BP670197.1,INSD:BP654012.1,
INSD:EL310563.1,INSD:BP632605.1,INSD:AV783672.1,
INSD:EH845854.1,INSD:EG439165.1,INSD:BP634952.1,
INSD:EL136789.1,INSD:EL235995.1,INSD:BP824657.1,
INSD:BP808433.1,INSD:EL158340.1,INSD:EG505187.1,
INSD:EH833782.1,INSD:BP668785.1,INSD:EL045230.1,
INSD:EL285229.1,INSD:EL099874.1,INSD:BP620231.1,
INSD:EL154113.1,INSD:BP820692.1,INSD:EL217515.1,
INSD:EL081205.1,INSD:EL095008.1,INSD:BP863137.1,
INSD:EL332254.1,INSD:BP595919.1,INSD:BP784794.1,
INSD:BP663426.1,INSD:EH856142.1,INSD:AV536907.1,
INSD:EG503835.1,INSD:BP663778.1,INSD:EL095489.1,
INSD:EH905137.1,INSD:BP864813.1,INSD:EH989492.1,
INSD:EL255141.1,INSD:EH982858.1,INSD:EL035052.1,
INSD:BP669391.1,INSD:EL073080.1,INSD:EH859831.1,
INSD:CB074261.1,INSD:EH910533.1,INSD:EL248095.1,
INSD:BP840479.1,INSD:EL114823.1,INSD:EL115715.1,
INSD:BP662710.1,INSD:BP634776.1,INSD:EL045411.1,
INSD:N38224.1,INSD:BP662397.1,INSD:EG501183.1,
INSD:EL205478.1,INSD:EL123267.1,INSD:CD531207.1,
INSD:BP629949.1,INSD:BE662892.1,INSD:BP634980.1,
INSD:EH981621.1,INSD:EG439160.1,INSD:EH956627.1,
INSD:EL055430.1,INSD:EL287077.1,INSD:EL048405.1,
INSD:EL232329.1,INSD:EL266566.1,INSD:EL055332.1,
INSD:EL271030.1,INSD:EL098558.1,INSD:EL207102.1,
INSD:EL147623.1,INSD:BP654468.1,INSD:EL243338.1,
INSD:BP864739.1,INSD:EG486605.1,INSD:EH886712.1,
INSD:EL160366.1,INSD:EL270725.1,INSD:EL217454.1,
INSD:BP562442.1,INSD:BP649819.1,INSD:EL147045.1,
INSD:EH993888.1,INSD:EH875106.1,INSD:EH983113.1,
INSD:EL309010.1,INSD:EL195541.1,INSD:BP629975.1,
INSD:EH846752.1,INSD:EL252422.1,INSD:BP819583.1,
INSD:EL198530.1,INSD:BP596335.1,INSD:BP666052.1,
INSD:EL226943.1,INSD:BP630845.1,INSD:EG486604.1,
INSD:EH956213.1,INSD:BE662975.1,INSD:EL057311.1,
INSD:BP617527.1,INSD:BP807597.1,INSD:BP669768.1,
INSD:EG520109.1,INSD:AV787877.1,INSD:EL057432.1,
INSD:AV814074.1,INSD:BP667365.1,INSD:EL314520.1,
INSD:EL203898.1,INSD:EL039944.1,INSD:BP857805.1,
INSD:AV804987.1,INSD:BP670109.1,INSD:EH936684.1,
INSD:BP668173.1,INSD:BP666449.1,INSD:EH840686.1,
INSD:EL070499.1,INSD:EH865450.1,INSD:EH987317.1,
INSD:EH825405.1,INSD:EL257668.1,INSD:BP665853.1,
INSD:EL334964.1,INSD:EH880284.1,INSD:EL329255.1,
INSD:BP641088.1,INSD:EL155806.1,INSD:EL005364.1,
INSD:EL178717.1,INSD:EL191858.1,INSD:BP593411.1,
INSD:BP867968.1,INSD:EL236704.1,INSD:EH862340.1,
INSD:EL283168.1,INSD:EL119178.1,INSD:EH989672.1,
INSD:EL072982.1,INSD:EL095848.1,INSD:EH964497.1,
INSD:AV544165.1,INSD:EL125148.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF424577.1,INSD:AY120719.1,INSD:BT011896.1,
INSD:BX818994.1,INSD:BT000036.1"
/note="TOUCH 3 (TCH3); FUNCTIONS IN: calcium ion binding;
INVOLVED IN: response to mechanical stimulus, response to
temperature stimulus, thigmotropism, response to absence
of light; LOCATED IN: plasma membrane; EXPRESSED IN: 26
plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding
site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249),
Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like
domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248);
BEST Arabidopsis thaliana protein match is: calmodulin 5
(TAIR:AT2G27030.3); Has 47548 Blast hits to 19426 proteins
in 1680 species: Archae - 4; Bacteria - 353; Metazoa -
18604; Fungi - 12275; Plants - 9433; Viruses - 2; Other
Eukaryotes - 6877 (source: NCBI BLink)."
/db_xref="Araport:AT2G41100"
/db_xref="TAIR:AT2G41100"
intron_pos 26:1 (1/3)
intron_pos 115:1 (2/3)
intron_pos 205:1 (3/3)
BEGIN
1 MADKLTDDQI TEYRESFRLF DKNGDGSITK KELGTMMRSI GEKPTKADLQ DLMNEADLDG
61 DGTIDFPEFL CVMAKNQGHD QAPRHTKKTM ADKLTDDQIT EYRESFRLFD KNGDGSITKK
121 ELRTVMFSLG KNRTKADLQD MMNEVDLDGD GTIDFPEFLY LMAKNQGHDQ APRHTKKTMV
181 DYQLTDDQIL EFREAFRVFD KNGDGYITVN ELRTTMRSLG ETQTKAELQD MINEADADGD
241 GTISFSEFVC VMTGKMIDTQ SKKETYRVVN QGQGQVQRHT RNDRAGGTNW ERDIAVGVAS
301 NIIASPISDF MKDRFKDLFE ALLS
//