LOCUS AEC09925.2 650 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pentatricopeptide (PPR) repeat protein
protein.
ACCESSION CP002685-6204
PROTEIN_ID AEC09925.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G41080"
/gene_synonym="T3K9.15"
/gene_synonym="T3K9_15"
/inference="Similar to RNA sequence, EST:INSD:EL044260.1"
/inference="similar to RNA sequence, mRNA:INSD:AY074642.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide
repeat (InterPro:IPR002885); BEST Arabidopsis thaliana
protein match is: Pentatricopeptide repeat (PPR)
superfamily protein (TAIR:AT4G13650.1); Has 35775 Blast
hits to 12998 proteins in 218 species: Archae - 0;
Bacteria - 5; Metazoa - 12; Fungi - 37; Plants - 35395;
Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink)."
/db_xref="Araport:AT2G41080"
/db_xref="TAIR:AT2G41080"
BEGIN
1 MRCSVSSVVR PLSVDPATAI ATLCSKGNLR EAFQRFRLNI FTNTSLFTPF IQSCTTRQSL
61 PSGKQLHCLL VVSGFSSDKF ICNHLMSMYS KLGDFPSAVA VYGRMRKKNY MSSNILINGY
121 VRAGDLVNAR KVFDEMPDRK LTTWNAMIAG LIQFEFNEEG LSLFREMHGL GFSPDEYTLG
181 SVFSGSAGLR SVSIGQQIHG YTIKYGLELD LVVNSSLAHM YMRNGKLQDG EIVIRSMPVR
241 NLVAWNTLIM GNAQNGCPET VLYLYKMMKI SGCRPNKITF VTVLSSCSDL AIRGQGQQIH
301 AEAIKIGASS VVAVVSSLIS MYSKCGCLGD AAKAFSERED EDEVMWSSMI SAYGFHGQGD
361 EAIELFNTMA EQTNMEINEV AFLNLLYACS HSGLKDKGLE LFDMMVEKYG FKPGLKHYTC
421 VVDLLGRAGC LDQAEAIIRS MPIKTDIVIW KTLLSACNIH KNAEMAQRVF KEILQIDPND
481 SACYVLLANV HASAKRWRDV SEVRKSMRDK NVKKEAGISW FEHKGEVHQF KMGDRSQSKS
541 KEIYSYLKEL TLEMKLKGYK PDTASVLHDM DEEEKESDLV QHSEKLAVAF ALMILPEGAP
601 IRIIKNLRVC SDCHVAFKYI SVIKNREITL RDGSRFHHFI NGKCSCGDYW
//