LOCUS       AEC09900.1               924 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana ubiquitin-specific protease 5 protein.
ACCESSION   CP002685-6164
PROTEIN_ID  AEC09900.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="UBP5"
                     /locus_tag="AT2G40930"
                     /gene_synonym="ATUBP5"
                     /gene_synonym="PDE323"
                     /gene_synonym="PIGMENT DEFECTIVE EMBRYO 323"
                     /gene_synonym="T20B5.13"
                     /gene_synonym="T20B5_13"
                     /gene_synonym="ubiquitin-specific protease 5"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EL110594.1,INSD:EG512946.1,INSD:EL021880.1,
                     INSD:ES085004.1,INSD:AV811091.1,INSD:EG528216.1,
                     INSD:AV823614.1,INSD:EG431814.1,INSD:AV528159.1,
                     INSD:CB259370.1,INSD:CB259368.1,INSD:BX835489.1,
                     INSD:AV814375.1,INSD:ES184194.1,INSD:BE524500.1,
                     INSD:EL195439.1,INSD:AV529594.1,INSD:BX839200.1,
                     INSD:BP599044.1,INSD:AV523840.1,INSD:DR213931.1,
                     INSD:DR213930.1,INSD:EG512948.1,INSD:AV529665.1,
                     INSD:EG431815.1,INSD:AV784619.1,INSD:AV831017.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BT000300.1,INSD:AF048705.1,INSD:AY099701.1"
                     /note="ubiquitin-specific protease 5 (UBP5); CONTAINS
                     InterPro DOMAIN/s: Peptidase C19, ubiquitin
                     carboxyl-terminal hydrolase 2, conserved site
                     (InterPro:IPR018200), Peptidase C19, ubiquitin-specific
                     peptidase, DUSP domain (InterPro:IPR006615), Peptidase
                     C19, ubiquitin carboxyl-terminal hydrolase 2
                     (InterPro:IPR001394); BEST Arabidopsis thaliana protein
                     match is: ubiquitin-specific protease 9
                     (TAIR:AT4G10570.1); Has 10784 Blast hits to 7330 proteins
                     in 261 species: Archae - 0; Bacteria - 2; Metazoa - 5578;
                     Fungi - 1854; Plants - 1330; Viruses - 10; Other
                     Eukaryotes - 2010 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G40930"
                     /db_xref="TAIR:AT2G40930"
     intron_pos      47:2 (1/12)
     intron_pos      132:2 (2/12)
     intron_pos      181:0 (3/12)
     intron_pos      201:0 (4/12)
     intron_pos      233:0 (5/12)
     intron_pos      363:0 (6/12)
     intron_pos      410:0 (7/12)
     intron_pos      467:0 (8/12)
     intron_pos      553:0 (9/12)
     intron_pos      602:2 (10/12)
     intron_pos      789:2 (11/12)
     intron_pos      881:0 (12/12)
BEGIN
        1 MAEVSMGSSS SSTDLSPEEE RVFIRDIAIA AEANSKEGDT FYLITQRWWQ EWIEYVNQDQ
       61 PCNTNDGSSL SEHCDSPGSS TLKKPSRIDN SDLIYDSSLE DPSNTSEIIE TLQEGRDYVL
      121 LPQEVWNQLR SWYGGGPTLA RRVISSGLSQ TELAVEVYPL RLQLLLMPKS DHSAIRISKK
      181 ETIRELHRRA CEIFDLDSEH VRIWDYYGHQ KYSLMNDLDK TLDDANLQMD QDILVEVLDI
      241 NGTLSSAHIQ SAQENGLVDG DSTSILIEPS KSSLAAAGGF SSSRNAFRTG SVEVSQSFDN
      301 TYSSTGVTTR GSTAGLTGLL NLGNTCFMNS AIQCLVHTPE FASYFQEDYH QEINWQNPLG
      361 MVGELALAFG DLLRKLWAPG RTPIAPRPFK AKLARFAPQF SGYNQHDSQE LLAFLLDGLH
      421 EDLNRVKHKP YINSRDADGR PDEEVADEFW KNHIARNDSI IVDVCQGQYK STLVCPICNK
      481 VSVTFDPFMY LSLPLQFNTT RAITVTVFSC DKTALPSTIT VNVSKQGRCR DLIQALTNAC
      541 SLKQSEELKL AEIRNNFIHR LFEDPLIPLS SIKDDDHLAA YKLSKSSENT TLLRLVLRRR
      601 DQKAGEREST VQLKPCGTPL LSSASCGDAL TKGKIHCLVQ NMLSPFRREE SVGKKGNSDS
      661 SIPERRSARF NNTEEEDKVG GLKKAKKSNS SDLGASKLSL QLIDEDNKTI NLPDNEAEAM
      721 KLPSSATVTI YLDWTPELSG MYDITCLESL PEVLKYGPTT KKARSEPLSL YACLEAFLRE
      781 EPLVPDEMWF CPQCNERRQA SKKLDLWRLP EVLVIHLKRF SYSRSMKHKL ETFVNFPIHD
      841 LDLTKYVANK NLSQPQLYEL YALTNHYGGM GSGHYTAHIK LLDDSRWYNF DDSHISHINE
      901 DDVKSGAAYV LFYRRKSDAG GKMT
//