LOCUS AEC09896.1 449 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box and associated interaction
domains-containing protein protein.
ACCESSION CP002685-6158
PROTEIN_ID AEC09896.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G40910"
/gene_synonym="T20B5.11"
/gene_synonym="T20B5_11"
/inference="Similar to RNA sequence,
EST:INSD:EG430847.1,INSD:EG430845.1,INSD:EG431558.1,
INSD:EG430853.1,INSD:EG430824.1,INSD:EG430839.1,
INSD:EG430844.1,INSD:EG430825.1,INSD:EG431559.1,
INSD:EG430822.1,INSD:EG430843.1,INSD:EG430811.1,
INSD:EG430846.1,INSD:EG430854.1,INSD:EG430826.1,
INSD:EG430850.1,INSD:EG430849.1"
/inference="similar to RNA sequence, mRNA:INSD:AY219123.1"
/note="F-box and associated interaction domains-containing
protein; CONTAINS InterPro DOMAIN/s: F-box domain,
cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like
(InterPro:IPR022364), F-box associated domain, type 3
(InterPro:IPR013187), F-box associated interaction domain
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box and associated interaction
domains-containing protein (TAIR:AT2G40920.1); Has 35333
Blast hits to 34131 proteins in 2444 species: Archae -
798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants
- 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="Araport:AT2G40910"
/db_xref="TAIR:AT2G40910"
intron_pos 36:0 (1/2)
intron_pos 61:1 (2/2)
BEGIN
1 MKRRRRDLKQ AAESEQEECQ SVPQVVSLRD SDQLQIMDEK GDNSLALLPA KLPMRMCSTR
61 ERRKYTCEIP PDLLMEIVMR LPAKSMVRFK CISKQWSSLI SCRYFCNSLF TSVTRKKQPH
121 IHMCLVDHGG QRVLLSLSST SPDNTCYVVD QDLSLTGMGG FFLNLVRGLL CFSVREKACI
181 YNPTTRQRLT LPAIKSDIIA LKDERKDIRY YIGHDPVNDQ YKLVCTIGIS SAFFTNLKSE
241 HWVFVLEAGG SWRKVRTLES YHPHAPSTVG QFINGSVVYY MAWLDMDTCA VVSFDITSEE
301 LTTIIVTLEA GDVALPAGRM KAGLIQYHGE IAVFDHTHLK EKFLVDLWVL KDAGMKKWSK
361 KRLVLQPCQK HLVHDDIELV VKGTTQDGKV ILAPVNMCSQ LYILCYDMGS NDLRKVEIKG
421 VPDIWFDKEC YFDLKYSLDE SEDVIYLET
//