LOCUS AEC09895.1 442 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box and associated interaction
domains-containing protein protein.
ACCESSION CP002685-6159
PROTEIN_ID AEC09895.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G40910"
/gene_synonym="T20B5.11"
/gene_synonym="T20B5_11"
/inference="Similar to RNA sequence,
EST:INSD:EG430853.1,INSD:EG431559.1,INSD:EG430842.1,
INSD:EG431558.1,INSD:EG430811.1,INSD:EG430854.1,
INSD:EG430823.1,INSD:EG430840.1"
/inference="similar to RNA sequence, mRNA:INSD:AY219124.1"
/note="F-box and associated interaction domains-containing
protein; CONTAINS InterPro DOMAIN/s: F-box domain,
cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like
(InterPro:IPR022364), F-box associated domain, type 3
(InterPro:IPR013187), F-box associated interaction domain
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box and associated interaction
domains-containing protein (TAIR:AT2G40920.1); Has 35333
Blast hits to 34131 proteins in 2444 species: Archae -
798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants
- 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="Araport:AT2G40910"
/db_xref="TAIR:AT2G40910"
intron_pos 18:1 (1/2)
intron_pos 54:1 (2/2)
BEGIN
1 MSERSPGRLS QRFRSTSVSN CCFVVSLKIM DEKGDNSLAL LPAKLPMRMC STRERRKYTC
61 EIPPDLLMEI VMRLPAKSMV RFKCISKQWS SLISCRYFCN SLFTSVTRKK QPHIHMCLVD
121 HGGQRVLLSL SSTSPDNTCY VVDQDLSLTG MGGFFLNLVR GLLCFSVREK ACIYNPTTRQ
181 RLTLPAIKSD IIALKDERKD IRYYIGHDPV NDQYKLVCTI GISSAFFTNL KSEHWVFVLE
241 AGGSWRKVRT LESYHPHAPS TVGQFINGSV VYYMAWLDMD TCAVVSFDIT SEELTTIIVT
301 LEAGDVALPA GRMKAGLIQY HGEIAVFDHT HLKEKFLVDL WVLKDAGMKK WSKKRLVLQP
361 CQKHLVHDDI ELVVKGTTQD GKVILAPVNM CSQLYILCYD MGSNDLRKVE IKGVPDIWFD
421 KECYFDLKYS LDESEDVIYL ET
//