LOCUS AEC09861.1 389 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Nucleic acid-binding, OB-fold-like
protein protein.
ACCESSION CP002685-6106
PROTEIN_ID AEC09861.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G40660"
/gene_synonym="T7D17.16"
/gene_synonym="T7D17_16"
/inference="Similar to RNA sequence,
EST:INSD:DR229811.1,INSD:DR229803.1,INSD:BP578927.1,
INSD:EG455120.1,INSD:EG453683.1,INSD:BP625531.1,
INSD:AV785319.1,INSD:DR229810.1,INSD:AV527710.1,
INSD:EG452676.1,INSD:DR229807.1,INSD:EG453688.1,
INSD:EG452670.1,INSD:CF652631.1,INSD:BP563693.1,
INSD:BP573586.1,INSD:EG452660.1,INSD:EL011848.1,
INSD:EL146973.1,INSD:DR229802.1,INSD:DR229808.1,
INSD:EG430530.1,INSD:BP561176.1,INSD:AV561173.1,
INSD:ES051428.1,INSD:DR229801.1,INSD:BP582868.1,
INSD:EL976338.1,INSD:ES105096.1,INSD:EL151821.1,
INSD:BP648159.1,INSD:EG452659.1,INSD:EL231719.1,
INSD:EG453690.1,INSD:EG452669.1,INSD:BP583750.1,
INSD:DR229806.1,INSD:EH953925.1,INSD:EG452677.1,
INSD:EH898293.1,INSD:DR229805.1,INSD:EL983465.1,
INSD:EG452662.1,INSD:EG452666.1,INSD:EL151485.1,
INSD:EL261415.1,INSD:EG452668.1,INSD:DR229799.1,
INSD:EG452673.1,INSD:CK118468.1,INSD:EG452671.1,
INSD:EH828547.1,INSD:ES142578.1,INSD:EL170826.1,
INSD:ES198391.1,INSD:AV821634.1,INSD:EG452674.1,
INSD:EL270358.1,INSD:EL123876.1,INSD:DR233307.1,
INSD:AV521078.1,INSD:DR229804.1,INSD:DR229798.1,
INSD:BP671568.1,INSD:DR229809.1,INSD:EH922104.1,
INSD:BP631535.1,INSD:EL034667.1,INSD:EL978312.1,
INSD:EH812358.1,INSD:EG452672.1,INSD:EG452661.1,
INSD:DR377599.1,INSD:DR229800.1,INSD:AV782147.1,
INSD:EG453686.1,INSD:DR229797.1,INSD:BP588339.1,
INSD:ES022926.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY059110.1,INSD:AY034925.1,INSD:BX819555.1,
INSD:AK222054.1,INSD:BT014745.1"
/note="Nucleic acid-binding, OB-fold-like protein;
FUNCTIONS IN: tRNA binding; INVOLVED IN: tRNA
aminoacylation for protein translation; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: Nucleic acid-binding,
OB-fold-like (InterPro:IPR016027), Nucleic acid-binding,
OB-fold (InterPro:IPR012340), tRNA-binding domain
(InterPro:IPR002547); BEST Arabidopsis thaliana protein
match is: methionine--tRNA ligase, putative /
methionyl-tRNA synthetase, putative / MetRS, putative
(TAIR:AT4G13780.1); Has 6072 Blast hits to 6060 proteins
in 2115 species: Archae - 244; Bacteria - 4267; Metazoa -
483; Fungi - 217; Plants - 163; Viruses - 1; Other
Eukaryotes - 697 (source: NCBI BLink)."
/db_xref="Araport:AT2G40660"
/db_xref="TAIR:AT2G40660"
intron_pos 22:0 (1/11)
intron_pos 55:0 (2/11)
intron_pos 112:0 (3/11)
intron_pos 134:0 (4/11)
intron_pos 156:0 (5/11)
intron_pos 197:0 (6/11)
intron_pos 250:2 (7/11)
intron_pos 281:0 (8/11)
intron_pos 304:0 (9/11)
intron_pos 334:2 (10/11)
intron_pos 356:0 (11/11)
BEGIN
1 MDSKAKQMIL SALCKHFSLD PEPFVGGAGE SDIKTLYSNV LKASGKEVSA QNNDVLKWLD
61 FAEGFSSDSK DWFSALEKLN LELATKSVLL GNGLTPSAAD VAVFSALHSS VLGLSDSDKE
121 KVPHVIRWVN YIQNKEELST LFAPIPVKLP EFSFEVPKPA IKVETNSNSK KAAEGVKPVD
181 KPDVQPQLGT KKTEPEEPKK NAAKEKDAKK EKKKPAEPEP AKKEAELSVS LLNIQVGLIR
241 KAWKHPSADS LLVEEIDVGE DKVRQVVSGL AKFCSPEDLT NRLVALITNV KPGKLRDVMS
301 QGLVLCASSE DHSVVEPLLP PAGAKPGERV SFSGIEGKPE DVLNPKKKQL EKITPGLYTD
361 ENGVATYKGI QFMTSAGPCT SSIPKATIK
//