LOCUS AEC09857.1 383 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002685-6096
PROTEIN_ID AEC09857.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G40640"
/gene_synonym="T7D17.18"
/gene_synonym="T7D17_18"
/inference="Similar to RNA sequence,
EST:INSD:EG435696.1,INSD:EG435704.1,INSD:EL989745.1,
INSD:DR327122.1,INSD:DR371105.1,INSD:EL209706.1,
INSD:EG435705.1,INSD:BP839420.1,INSD:BX840347.1,
INSD:ES096556.1,INSD:EG435694.1,INSD:EH967477.1,
INSD:AV815285.1,INSD:EG445374.1,INSD:ES041968.1,
INSD:EG436026.1,INSD:EG445378.1,INSD:AV785223.1,
INSD:BP836995.2,INSD:DR327120.1,INSD:ES153680.1,
INSD:EG435700.1,INSD:BP855958.1,INSD:EL178823.1,
INSD:EG435754.1,INSD:EG445377.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY461622.1,INSD:AK175771.1,INSD:AY168999.1,
INSD:BX818846.1,INSD:AK227154.1,INSD:AY954825.1,
INSD:AK176741.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 6 growth stages; BEST Arabidopsis thaliana protein
match is: RING/U-box superfamily protein
(TAIR:AT5G05230.1); Has 69 Blast hits to 69 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 68; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink)."
/db_xref="Araport:AT2G40640"
/db_xref="TAIR:AT2G40640"
intron_pos 136:1 (1/7)
intron_pos 211:2 (2/7)
intron_pos 239:0 (3/7)
intron_pos 258:1 (4/7)
intron_pos 288:0 (5/7)
intron_pos 320:0 (6/7)
intron_pos 343:2 (7/7)
BEGIN
1 MSHLRRRRFK LSLCALPVSI DRLLNFPAEK QMSVNDSIDP RFVFHVEDES LRFRVGDSGT
61 KIRELETVGD RHFRTQQGFC GNRIEKDETM YSDGDDEEYD VSIRRRTALI QPGIDSGNNY
121 DSAAAEETNR ESKNPVGWEL VVREDGEGNS TIDRHEMEFK VRITKPDGNV SNSHRNTQQK
181 RDFASVEKER VTTTSVSSWE SLKAILSDPV TGALMNDATI LPCGHSFGAG GLKEVKKMKA
241 CFTCSQPTLE GSEKPNLSLR IVVHAFRQEE DSDHIHTLKR RKERSDQKRS FCIPNITETP
301 KSSRGIQFPF SIGDHIIIEG NKRTPPRFVG RIAVIMTQCL NGWYVVKTVD NSESIKLQHC
361 SLAKISDNSS TKVTVAEMPP SWL
//