LOCUS AEC09850.1 462 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana initiator tRNA phosphoribosyl transferase
family protein protein.
ACCESSION CP002685-6086
PROTEIN_ID AEC09850.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G40570"
/gene_synonym="T2P4.8"
/gene_synonym="T2P4_8"
/inference="Similar to RNA sequence,
EST:INSD:EG424300.1,INSD:BE526783.1,INSD:BP790551.1,
INSD:EH809296.1,INSD:ES142513.1,INSD:AU235926.1"
/note="initiator tRNA phosphoribosyl transferase family
protein; FUNCTIONS IN: transferase activity, transferring
pentosyl groups; INVOLVED IN: regulation of translation;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Initiator tRNA phosphoribosyl
transferase (InterPro:IPR007306), tRNA
A64-2'-O-ribosylphosphate transferase, RIT1
(InterPro:IPR016519); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G40570"
/db_xref="TAIR:AT2G40570"
intron_pos 102:1 (1/5)
intron_pos 151:0 (2/5)
intron_pos 376:1 (3/5)
intron_pos 410:0 (4/5)
intron_pos 447:2 (5/5)
BEGIN
1 MGAKSEEPMM TTRDSIYRAA RNIKRRDNSL YNALRSIYQD SIFVHEISLL WPKLPLVANL
61 RCGLWYSEKF DATCYFKSTD GHTNNLSFNT SRLNLHLPLL AGEKGGCIII DSTRKGKRFP
121 DSMSKTIPMW SCVVNRSIFN HWNRLCNIDA GLTSDDDGDN IRKLLDKWDC SLHLPLWVSN
181 TERASIEARL DEWTRELDES GADIASLASC LRKPLRPLWV SQKTVIWLNE VPEHDSWDFT
241 PLILVSASAS GELQNRTSSE FSWNYIPGAG DDEESWARGL SPNVFWTHVD DLIHSGPDLC
301 NQKVAEIVEN DRVYRAHRGQ EAPQVVVKCS KSNGGVNHAK SDEILCLSAQ IPKVDEERLV
361 FWLSSTNLAV GASQVACKET SIDCILNCDQ NPISVPVSYL EEHLHLPMKG SKFDRFSISR
421 NLPPAVNFAK LKMSSGKKVL VCCQDGKYQY MCLLGHLDVI IQ
//