LOCUS AEC09821.1 496 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana neuronal PAS domain protein protein.
ACCESSION CP002685-6048
PROTEIN_ID AEC09821.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G40390"
/gene_synonym="T3G21.16"
/gene_synonym="T3G21_16"
/inference="Similar to RNA sequence,
EST:INSD:EG441906.1,INSD:EG441912.1,INSD:EG441063.1,
INSD:EG441914.1,INSD:EG441056.1,INSD:EG441058.1,
INSD:EG441049.1,INSD:EL109302.1,INSD:EG441046.1,
INSD:EG441908.1,INSD:EG441385.1,INSD:EG441048.1,
INSD:EG441060.1,INSD:EG441041.1,INSD:EG441913.1,
INSD:EG441050.1,INSD:EG441916.1,INSD:EG441910.1,
INSD:EG441057.1,INSD:EG441911.1,INSD:BP795236.1,
INSD:EG441059.1,INSD:EG441061.1,INSD:EG441907.1,
INSD:BX837362.1,INSD:EH796609.1,INSD:EG441066.1,
INSD:EG441055.1,INSD:EG441915.1,INSD:EG441064.1,
INSD:EG441062.1,INSD:EG441388.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY649297.1,INSD:AY102557.1,INSD:BX819031.1"
/note="unknown protein; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64190.1); Has 75 Blast
hits to 75 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink)."
/db_xref="Araport:AT2G40390"
/db_xref="TAIR:AT2G40390"
intron_pos 284:2 (1/1)
BEGIN
1 MASCDTPDAF AWLQTLPPLS LWKGNLMSMC ICSPNSSHPS LNFTLTRTPQ SPNFFTFSIV
61 ANFKTPITLF ISKTFRTIST NSTTFLNENV ISTLLMGFVD VVLNYNVKRT TCSIQLQNLG
121 STSNLKDVFN LAFFTFVFLI CIYEAPTSLR TTCLKTVKDQ LVTCRSRQGS KLLMVQLGSN
181 LEEQWMRSLN LAITNWIIEI KAFQHLKSPS PLFSYAFSTQ GLWKVHMYCP VVAMEMESVN
241 SSLNDERLFF SLNYHQLEGV IQLNHRIYVR EKWFNVAVNI DNVRCDIIRL VNEKLLSERG
301 MGTEEKHFPS RISLQLTPTN QSNILMVSVQ KSSENPLTEF EVEKGIEATI DPPNTFFGLK
361 VSANETTTKS MKPWKFEEWV HGYSANLTWF LHDLDDGREV SSSKPSKVSM MNPRAWFKNR
421 YSSAFRPFTK QGGVVFAGDS YGQSVLWKVD KTAIGKVMEF EVKGCVWLTY WPNKHHTFYS
481 DTRKLEFKEM LYLNLP
//