LOCUS AEC09816.1 341 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Integrase-type DNA-binding superfamily
protein protein.
ACCESSION CP002685-6037
PROTEIN_ID AEC09816.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="DREB2C"
/locus_tag="AT2G40340"
/gene_synonym="AtERF48"
/gene_synonym="T7M7.18"
/inference="Similar to RNA sequence,
EST:INSD:DR379841.1,INSD:DR294451.1,INSD:DN604511.1,
INSD:ES124980.1,INSD:DR294452.1,INSD:DR750912.1,
INSD:DR294453.1,INSD:DR750911.1,INSD:ES044679.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819101.1,INSD:AY084695.1,INSD:BT026505.1"
/note="DREB2C; CONTAINS InterPro DOMAIN/s: DNA-binding,
integrase-type (InterPro:IPR016177), Pathogenesis-related
transcriptional factor/ERF, DNA-binding
(InterPro:IPR001471); BEST Arabidopsis thaliana protein
match is: Integrase-type DNA-binding superfamily protein
(TAIR:AT2G40350.1); Has 5601 Blast hits to 5564 proteins
in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 5583; Viruses - 4; Other Eukaryotes -
14 (source: NCBI BLink)."
/db_xref="Araport:AT2G40340"
/db_xref="TAIR:AT2G40340"
intron_pos 8:2 (1/1)
BEGIN
1 MPSEIVDRKR KSRGTRDVAE ILRQWREYNE QIEAESCIDG GGPKSIRKPP PKGSRKGCMK
61 GKGGPENGIC DYRGVRQRRW GKWVAEIREP DGGARLWLGT FSSSYEAALA YDEAAKAIYG
121 QSARLNLPEI TNRSSSTAAT ATVSGSVTAF SDESEVCARE DTNASSGFGQ VKLEDCSDEY
181 VLLDSSQCIK EELKGKEEVR EEHNLAVGFG IGQDSKRETL DAWLMGNGNE QEPLEFGVDE
241 TFDINELLGI LNDNNVSGQE TMQYQVDRHP NFSYQTQFPN SNLLGSLNPM EIAQPGVDYG
301 CPYVQPSDME NYGIDLDHRR FNDLDIQDLD FGGDKDVHGS T
//