LOCUS AEC09812.1 276 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana autophagy-like protein protein.
ACCESSION CP002685-6031
PROTEIN_ID AEC09812.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G40316"
/gene_synonym="AT2G40313"
/gene_synonym="T7M7.21"
/gene_synonym="T7M7_21"
/inference="Similar to RNA sequence,
EST:INSD:EL214837.1,INSD:ES046387.1,INSD:EG427351.1,
INSD:AU226223.1,INSD:EL968930.1,INSD:EG427378.1,
INSD:EG427901.1,INSD:EG427371.1,INSD:DR237736.1,
INSD:EG427379.1,INSD:EH995220.1,INSD:AU235509.1,
INSD:EG427370.1,INSD:EG427414.1,INSD:ES139148.1,
INSD:EG427376.1,INSD:BP574020.1,INSD:EG427406.1,
INSD:EG427403.1,INSD:EH957895.1,INSD:EL264163.1,
INSD:EG427353.1,INSD:EG427900.1,INSD:ES083368.1,
INSD:EL160736.1,INSD:EG428504.1,INSD:EH826901.1,
INSD:EG427325.1,INSD:EL997890.1,INSD:EG427413.1,
INSD:EH902407.1,INSD:EH974722.1,INSD:BP567936.1,
INSD:EH886349.1,INSD:EG427377.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK227563.1,INSD:DQ069793.1"
/note="FUNCTIONS IN: molecular_function unknown; LOCATED
IN: endomembrane system; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Autophagy-related protein 27
(InterPro:IPR018939); Has 138 Blast hits to 138 proteins
in 57 species: Archae - 0; Bacteria - 0; Metazoa - 32;
Fungi - 62; Plants - 33; Viruses - 0; Other Eukaryotes -
11 (source: NCBI BLink)."
/db_xref="Araport:AT2G40316"
/db_xref="TAIR:AT2G40316"
intron_pos 57:2 (1/10)
intron_pos 72:0 (2/10)
intron_pos 90:0 (3/10)
intron_pos 111:1 (4/10)
intron_pos 130:1 (5/10)
intron_pos 166:0 (6/10)
intron_pos 179:0 (7/10)
intron_pos 208:2 (8/10)
intron_pos 235:0 (9/10)
intron_pos 251:0 (10/10)
BEGIN
1 MSGKLWIPRF ILITLLFISS RVNSQCEFSF TGRNKVFHFN LASSIRNYPH GVLSEDGFYK
61 VEANSSVLWF QLCDVLIFNH DPPRCVGCED CGGPSHCGTS CSALVSENVR GYDVCTSLGH
121 ASSTKVDIID KEDPGKGVIV QMSTGNRNQN CSLSVSVICQ KTKVDGPLTL AKSGTCQYAT
181 QLRHPAGCAA AISGHSSGWG WFSTLLIIIL CLFGAYLVGG AVYRYFSLGI RGIDVIPNMD
241 YWATVPHSIQ SCFGSLFSRF GGSIRGQQTS YSQVNF
//