LOCUS AEC09790.1 427 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana trichome birefringence-like protein
(DUF828) protein.
ACCESSION CP002685-6008
PROTEIN_ID AEC09790.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="TBL30"
/locus_tag="AT2G40160"
/gene_synonym="T7M7.25"
/gene_synonym="T7M7_25"
/inference="Similar to RNA sequence,
EST:INSD:EL259944.1,INSD:AV799345.1,INSD:ES015100.1,
INSD:T45334.1,INSD:AA586102.1,INSD:EL992538.1,
INSD:ES052471.1,INSD:EL136792.1,INSD:AV827774.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY056791.1,INSD:AY113175.1"
/note="TBL30; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf
whorl, hypocotyl, root, leaf; EXPRESSED DURING: LP.02 two
leaves visible; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF231, plant (InterPro:IPR004253); BEST
Arabidopsis thaliana protein match is: Plant protein of
unknown function (DUF828) (TAIR:AT3G55990.1); Has 1330
Blast hits to 1307 proteins in 27 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1330;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G40160"
/db_xref="TAIR:AT2G40160"
intron_pos 132:2 (1/4)
intron_pos 190:0 (2/4)
intron_pos 257:2 (3/4)
intron_pos 312:2 (4/4)
BEGIN
1 MKQTDGRERK AYLSLLYFAV ILLPVFLLGC YLYNEKQLRV GQFQEFNTHN LQEHITPLQQ
61 SKEDKDKKTD LVPLEFCDVF TGKWVLDNVT HPLYKEDECE FLSEWVACTR NGRPDSKYQK
121 WRWQPQDCSL PRFDSKLLLE KLRGKKLMFI GDSIHYNQWQ SMVCMVQSVI PSGKKTLKHT
181 AQMSIFNIEE YNATISFYWA PFLVESNADP PDKRDGKTDP VIIPNSISKH GENWKDADYL
241 IFNTYIWWTR HSTIKVLKQE SFNKGDSKEY NEIGIYIVYK QVLSTWTKWL EQNINPSQTS
301 IFFSSMSPTH IRSSDWGFNE GSKCEKETEP ILNMSKPINV GTNRRLYEIA LNATKSTKVP
361 IHFLNITTMS EYRKDGHTSF YGSINGKLMT PEQKLDPRTF ADCYHWCLPG LPDSWNELLS
421 LYIIYKI
//