LOCUS AEC09788.1 597 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc finger (CCCH-type) family protein
protein.
ACCESSION CP002685-6005
PROTEIN_ID AEC09788.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="CZF1"
/locus_tag="AT2G40140"
/gene_synonym="(SALT-INDUCIBLE ZINC FINGER 2"
/gene_synonym="ATSZF2"
/gene_synonym="SZF2"
/gene_synonym="T7M7.3"
/gene_synonym="T7M7_3"
/gene_synonym="ZFAR1"
/inference="Similar to RNA sequence,
EST:INSD:Z34239.1,INSD:EL338816.1,INSD:DR291509.1,
INSD:EL203265.1,INSD:CD530091.1,INSD:AW004300.1,
INSD:BP782336.1,INSD:EL273680.1,INSD:EL059402.1,
INSD:BP807715.1,INSD:AV538234.1,INSD:BE530232.1,
INSD:EL113209.1,INSD:T43596.1,INSD:AV802991.1,
INSD:EH831362.1,INSD:EG459947.1,INSD:F15456.1,
INSD:BP636011.1,INSD:AA395333.1,INSD:CB254410.1,
INSD:CD534782.1,INSD:DR372347.1,INSD:EH943090.1,
INSD:EL264485.1,INSD:EL104578.1,INSD:Z34649.1,
INSD:BP604545.1,INSD:EH807770.1,INSD:EL210851.1,
INSD:EL223766.1,INSD:EH821881.1,INSD:AV820768.1,
INSD:BP789193.1,INSD:AV552584.1,INSD:CD534783.1,
INSD:EG459948.1,INSD:AV811391.1,INSD:BP852264.1,
INSD:AI998600.1,INSD:EH856590.1,INSD:EL149181.1,
INSD:AA389818.1,INSD:BP611237.1,INSD:EH969435.1,
INSD:EH797117.1"
/inference="similar to RNA sequence, mRNA:INSD:AY128937.1"
/note="CZF1; CONTAINS InterPro DOMAIN/s: Zinc finger,
CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing
domain (InterPro:IPR020683), Ankyrin repeat
(InterPro:IPR002110); BEST Arabidopsis thaliana protein
match is: salt-inducible zinc finger 1 (TAIR:AT3G55980.1);
Has 35333 Blast hits to 34131 proteins in 2444 species:
Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi -
991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink)."
/db_xref="Araport:AT2G40140"
/db_xref="TAIR:AT2G40140"
BEGIN
1 MCGAKSNLCS SKTLTEVEFM RQKSEDGASA TCLLEFAACD DLSSFKREIE ENPSVEIDES
61 GFWYCRRVGS KKMGFEERTP LMVAAMYGSM EVLNYIIATG RSDVNRVCSD EKVTALHCAV
121 SGCSVSIVEI IKILLDASAS PNCVDANGNK PVDLLAKDSR FVPNQSRKAV EVLLTGIHGS
181 VMEEEEEELK SVVTKYPADA SLPDINEGVY GTDDFRMFSF KVKPCSRAYS HDWTECPFVH
241 PGENARRRDP RKYPYTCVPC PEFRKGSCPK GDSCEYAHGV FESWLHPAQY RTRLCKDETG
301 CARRVCFFAH RRDELRPVNA STGSAMVSPR SSNQSPEMSV MSPLTLGSSP MNSPMANGVP
361 LSPRNGGLWQ NRVNSLTPPP LQLNGSRLKS TLSARDMDME MELRFRGLDN RRLGDLKPSN
421 LEETFGSYDS ASVMQLQSPS RHSQMNHYPS SPVRQPPPHG FESSAAMAAA VMNARSSAFA
481 KRSLSFKPAP VASNVSDWGS PNGKLEWGMQ RDELNKLRRS ASFGIHGNNN NSVSRPARDY
541 SDEPDVSWVN SLVKENAPER VNERVGNTVN GAASRDKFKL PSWAEQMYID HEQQIVA
//