LOCUS AEC09773.1 111 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana EARLY FLOWERING-like protein (DUF1313)
protein.
ACCESSION CP002685-5987
PROTEIN_ID AEC09773.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="ELF4"
/locus_tag="AT2G40080"
/gene_synonym="EARLY FLOWERING 4"
/gene_synonym="T28M21.24"
/gene_synonym="T28M21_24"
/inference="Similar to RNA sequence,
EST:INSD:CB263209.1,INSD:BP635371.1,INSD:DR195590.1,
INSD:DR210096.1,INSD:BP566554.1,INSD:EH898109.1,
INSD:EL209247.1,INSD:DR210098.1,INSD:DR195583.1,
INSD:CD529333.1,INSD:DR195587.1,INSD:BP846522.1,
INSD:T20549.1,INSD:DR195589.1,INSD:AV781878.1,
INSD:DR195585.1,INSD:CB263510.1,INSD:EG454229.1,
INSD:DR195581.1,INSD:T76137.1,INSD:BP652706.1,
INSD:DR195586.1,INSD:EG454228.1,INSD:BP826416.1,
INSD:EL340812.1,INSD:DR195580.1,INSD:R86791.1,
INSD:DR195588.1,INSD:DR210101.1,INSD:DR195579.1,
INSD:DR195591.1,INSD:AV545342.1,INSD:DR195584.1,
INSD:T45331.1,INSD:EL278285.1,INSD:AI993229.1,
INSD:EL044305.1,INSD:DR195592.1,INSD:BP829800.1,
INSD:EH978988.1,INSD:EL241088.1,INSD:EL265961.1,
INSD:DR195582.1,INSD:T43477.1,INSD:BP560573.2,
INSD:T46725.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY088748.1,INSD:AY035183.1,INSD:BX821090.1,
INSD:AY062963.1,INSD:BX821352.1"
/note="EARLY FLOWERING 4 (ELF4); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: in 7 processes;
LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF1313
(InterPro:IPR009741); BEST Arabidopsis thaliana protein
match is: ELF4-like 1 (TAIR:AT2G29950.1); Has 150 Blast
hits to 149 proteins in 35 species: Archae - 0; Bacteria -
3; Metazoa - 0; Fungi - 0; Plants - 146; Viruses - 0;
Other Eukaryotes - 1 (source: NCBI BLink)."
/db_xref="Araport:AT2G40080"
/db_xref="TAIR:AT2G40080"
BEGIN
1 MKRNGETKRR RNVAEEAEQG EDPAMWENLD RNFRQVQSVL DRNRSLIQQV NDNHQSRMAD
61 NMSKNVALIQ ELNGNISKVV NMYSDLNTSF SSGFHGGKNG HDGGGAAGTR A
//