LOCUS AEC09752.1 783 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana isoamylase 1 protein.
ACCESSION CP002685-5954
PROTEIN_ID AEC09752.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="ISA1"
/locus_tag="AT2G39930"
/gene_synonym="ARABIDOPSIS THALIANA ISOAMYLASE 1"
/gene_synonym="ATISA1"
/gene_synonym="isoamylase 1"
/gene_synonym="T28M21.9"
/gene_synonym="T28M21_9"
/inference="Similar to RNA sequence,
EST:INSD:BP579648.1,INSD:AV792699.1,INSD:EL269010.1,
INSD:AA597801.1,INSD:CF773799.1,INSD:ES149622.1,
INSD:T44285.1,INSD:ES191770.1,INSD:EL320463.1,
INSD:AA395754.1,INSD:AV797129.1,INSD:DR364857.1,
INSD:BP563536.1,INSD:ES102050.1,INSD:EH879523.1,
INSD:BE525738.1,INSD:BP579931.1,INSD:AA042450.1,
INSD:ES210005.1,INSD:AA650863.1,INSD:AV548204.1,
INSD:ES106958.1,INSD:AA651587.1,INSD:EH862357.1,
INSD:BP658356.1,INSD:EH959773.1,INSD:AV532328.1,
INSD:AV816564.1,INSD:AV549860.1,INSD:AA395857.1,
INSD:AA650873.1,INSD:AV564985.1,INSD:BP571028.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT000443.1,INSD:BT010348.1"
/note="isoamylase 1 (ISA1); FUNCTIONS IN: isoamylase
activity, alpha-amylase activity; INVOLVED IN:
carbohydrate metabolic process, amylopectin biosynthetic
process; LOCATED IN: chloroplast, chloroplast isoamylase
complex; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Immunoglobulin-like fold (InterPro:IPR013783), Glycoside
hydrolase, family 13, N-terminal (InterPro:IPR004193),
Immunoglobulin E-set (InterPro:IPR014756), Glycoside
hydrolase, catalytic core (InterPro:IPR017853), Glycoside
hydrolase, subgroup, catalytic core (InterPro:IPR013781),
Glycosyl hydrolase, family 13, catalytic domain
(InterPro:IPR006047); BEST Arabidopsis thaliana protein
match is: isoamylase 3 (TAIR:AT4G09020.1); Has 17979 Blast
hits to 17918 proteins in 2410 species: Archae - 161;
Bacteria - 15130; Metazoa - 257; Fungi - 410; Plants -
747; Viruses - 0; Other Eukaryotes - 1274 (source: NCBI
BLink)."
/db_xref="Araport:AT2G39930"
/db_xref="TAIR:AT2G39930"
intron_pos 111:0 (1/17)
intron_pos 172:0 (2/17)
intron_pos 203:0 (3/17)
intron_pos 254:0 (4/17)
intron_pos 284:2 (5/17)
intron_pos 332:0 (6/17)
intron_pos 368:0 (7/17)
intron_pos 396:2 (8/17)
intron_pos 420:2 (9/17)
intron_pos 463:0 (10/17)
intron_pos 492:0 (11/17)
intron_pos 523:0 (12/17)
intron_pos 575:0 (13/17)
intron_pos 603:0 (14/17)
intron_pos 630:0 (15/17)
intron_pos 657:2 (16/17)
intron_pos 697:0 (17/17)
BEGIN
1 MDAIKCSSSF LHHTKLNTLF SNHTFPKISA PNFKPLFRPI SISAKDRRSN EAENIAVVEK
61 PLKSDRFFIS DGLPSPFGPT VRDDGVNFSV YSTNSVSATI CLISLSDLRQ NKVTEEIQLD
121 PSRNRTGHVW HVFLRGDFKD MLYGYRFDGK FSPEEGHYYD SSNILLDPYA KAIISRDEFG
181 VLGPDDNCWP QMACMVPTRE EEFDWEGDMH LKLPQKDLVI YEMHVRGFTR HESSKIEFPG
241 TYQGVAEKLD HLKELGINCI ELMPCHEFNE LEYYSYNTIL GDHRVNFWGY STIGFFSPMI
301 RYASASSNNF AGRAINEFKI LVKEAHKRGI EVIMDVVLNH TAEGNEKGPI FSFRGVDNSV
361 YYMLAPKGEF YNYSGCGNTF NCNHPVVRQF ILDCLRYWVT EMHVDGFRFD LGSIMSRSSS
421 LWDAANVYGA DVEGDLLTTG TPISCPPVID MISNDPILRG VKLIAEAWDA GGLYQVGMFP
481 HWGIWSEWNG KFRDVVRQFI KGTDGFSGAF AECLCGSPNL YQGGRKPWHS INFICAHDGF
541 TLADLVTYNN KNNLANGEEN NDGENHNYSW NCGEEGDFAS ISVKRLRKRQ MRNFFVSLMV
601 SQGVPMIYMG DEYGHTKGGN NNTYCHDNYM NYFRWDKKEE AHSDFFRFCR ILIKFRDECE
661 SLGLNDFPTA KRLQWHGLAP EIPNWSETSR FVAFSLVDSV KKEIYVAFNT SHLATLVSLP
721 NRPGYRWEPF VDTSKPSPYD CITPDLPERE TAMKQYRHFL DANVYPMLSY SSIILLLSPI
781 KDP
//