LOCUS AEC09747.1 200 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana GATA type zinc finger transcription
factor family protein protein.
ACCESSION CP002685-5948
PROTEIN_ID AEC09747.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="WLIM2a"
/locus_tag="AT2G39900"
/gene_synonym="T28M21.6"
/gene_synonym="T28M21_6"
/inference="Similar to RNA sequence,
EST:INSD:ES092306.1,INSD:BE038914.1,INSD:ES010744.1,
INSD:EH870773.1,INSD:ES119747.1,INSD:ES001795.1,
INSD:EH994969.1,INSD:ES142221.1,INSD:BP828677.1,
INSD:EH863592.1,INSD:EH840048.1,INSD:EH800488.1,
INSD:EH822999.1,INSD:DR233742.1,INSD:BP638536.1,
INSD:DR233743.1,INSD:EL010538.1,INSD:ES209233.1,
INSD:BE530773.1,INSD:EL087076.1,INSD:DR233744.1,
INSD:EH894035.1,INSD:EL972811.1,INSD:BP833583.1,
INSD:BP596211.1,INSD:BP777579.1,INSD:AV824278.1,
INSD:EL219886.1,INSD:EH802111.1,INSD:EL130291.1,
INSD:BP819220.1,INSD:CF652509.1,INSD:BP646250.1,
INSD:EL308864.1,INSD:R84178.1,INSD:BP839511.1,
INSD:DR232274.1,INSD:AV785503.1,INSD:BP579203.1,
INSD:BP590188.1,INSD:ES206380.1,INSD:BP656352.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX842049.1,INSD:AY094448.1,INSD:BX842053.1,
INSD:AY122901.1"
/note="GATA type zinc finger transcription factor family
protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc
finger, LIM-type (InterPro:IPR001781), Zinc finger,
RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana
protein match is: GATA type zinc finger transcription
factor family protein (TAIR:AT3G55770.5); Has 4468 Blast
hits to 3092 proteins in 184 species: Archae - 0; Bacteria
- 0; Metazoa - 3526; Fungi - 76; Plants - 531; Viruses -
0; Other Eukaryotes - 335 (source: NCBI BLink)."
/db_xref="Araport:AT2G39900"
/db_xref="TAIR:AT2G39900"
intron_pos 46:0 (1/4)
intron_pos 79:1 (2/4)
intron_pos 92:0 (3/4)
intron_pos 122:0 (4/4)
BEGIN
1 MSFTGTQQKC RACEKTVYPV ELLSADGISY HKACFKCSHC KSRLQLSNYS SMEGVVYCRP
61 HFEQLFKESG SFSKNFQSPA KPLTDKPTPE LNRTPSRLAG MFSGTQDKCA TCTKTVYPIE
121 KVTVESQCYH KSCFKCSHGG CPISPSNYAA LEGILYCKHH FAQLFKEKGS YNHLIKSASI
181 KRATAAATAA AAAVAAVPES
//