LOCUS AEC09736.1 528 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DA1-related protein 2 protein.
ACCESSION CP002685-5931
PROTEIN_ID AEC09736.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="DAR2"
/locus_tag="AT2G39830"
/gene_synonym="DA1-related protein 2"
/gene_synonym="LATERAL ROOT DEVELOPMENT 3"
/gene_synonym="LRD3"
/gene_synonym="T5I7.13"
/gene_synonym="T5I7_13"
/inference="Similar to RNA sequence,
EST:INSD:EG441377.1,INSD:BP833618.1,INSD:EG441378.1,
INSD:BP639848.1,INSD:BP819288.1,INSD:BP839351.1,
INSD:AU226578.1,INSD:EG441379.1,INSD:EG441370.1,
INSD:AU235813.1,INSD:EG441382.1,INSD:EG441380.1,
INSD:EG441381.1,INSD:BP836863.1,INSD:EG441373.1,
INSD:BP822739.1,INSD:EG441349.1,INSD:EG441368.1,
INSD:EG441351.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY429348.1,INSD:AK227895.1"
/note="DA1-related protein 2 (DAR2); FUNCTIONS IN: zinc
ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type
(InterPro:IPR001781), Protein of unknown function DUF3633
(InterPro:IPR022087); BEST Arabidopsis thaliana protein
match is: LIM domain-containing protein
(TAIR:AT4G36860.1); Has 1539 Blast hits to 1276 proteins
in 109 species: Archae - 0; Bacteria - 10; Metazoa - 1178;
Fungi - 26; Plants - 170; Viruses - 0; Other Eukaryotes -
155 (source: NCBI BLink)."
/db_xref="Araport:AT2G39830"
/db_xref="TAIR:AT2G39830"
intron_pos 31:1 (1/11)
intron_pos 92:0 (2/11)
intron_pos 121:1 (3/11)
intron_pos 160:2 (4/11)
intron_pos 201:0 (5/11)
intron_pos 229:0 (6/11)
intron_pos 269:0 (7/11)
intron_pos 340:0 (8/11)
intron_pos 361:0 (9/11)
intron_pos 399:2 (10/11)
intron_pos 419:1 (11/11)
BEGIN
1 MDSSSSSSSS SPSSSYGVAR VSHISNPCIF GEVGSSSSST YRDKKWKLMK WVSKLFKSGS
61 NGGGSGAHTN HHPPQFQEDE NMVFPLPPSS LDDRSRGARD KEELDRSISL SLADNTKRPH
121 GYGWSMDNNR DFPRPFHGGL NPSSFIPPYE PSYQYRRRQR ICGGCNSDIG SGNYLGCMGT
181 FFHPECFRCH SCGYAITEHE FSLSGTKPYH KLCFKELTHP KCEVCHHFIP TNDAGLIEYR
241 CHPFWNQKYC PSHEYDKTAR CCSCERLESW DVRYYTLEDG RSLCLECMET AITDTGECQP
301 LYHAIRDYYE GMYMKLDQQI PMLLVQREAL NDAIVGEKNG YHHMPETRGL CLSEEQTVTS
361 VLRRPRLGAH RLVGMRTQPQ RLTRKCEVTA ILVLYGLPRL LTGAILAHEL MHGWLRLNGF
421 RNLNPEVEEG ICQVLSYMWL ESEVLSDPST RNLPSTSSVA TSSSSSFSNK KGGKSNVEKK
481 LGEFFKHQIA HDASPAYGGG FRAANAAACK YGLRRTLDHI RLTGTFPL
//