LOCUS       AEC09735.1               247 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana Translation initiation factor IF6 protein.
ACCESSION   CP002685-5929
PROTEIN_ID  AEC09735.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="eIF6B"
                     /locus_tag="AT2G39820"
                     /gene_synonym="eukaryotic initiation factor 6B"
                     /gene_synonym="T5I7.12"
                     /gene_synonym="T5I7_12"
                     /inference="Similar to RNA sequence, EST:INSD:ES054501.1"
                     /inference="similar to RNA sequence, mRNA:INSD:BX821100.1"
                     /note="Translation initiation factor IF6; FUNCTIONS IN:
                     ribosome binding, translation initiation factor activity;
                     INVOLVED IN: translational initiation, mature ribosome
                     assembly; LOCATED IN: cellular_component unknown;
                     EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L
                     mature pollen stage, M germinated pollen stage, 4
                     anthesis, petal differentiation and expansion stage;
                     CONTAINS InterPro DOMAIN/s: Translation initiation factor
                     IF6 (InterPro:IPR002769); BEST Arabidopsis thaliana
                     protein match is: Translation initiation factor IF6
                     (TAIR:AT3G55620.1); Has 945 Blast hits to 938 proteins in
                     349 species: Archae - 262; Bacteria - 0; Metazoa - 235;
                     Fungi - 146; Plants - 134; Viruses - 0; Other Eukaryotes -
                     168 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G39820"
                     /db_xref="TAIR:AT2G39820"
     intron_pos      4:1 (1/4)
     intron_pos      38:2 (2/4)
     intron_pos      82:1 (3/4)
     intron_pos      163:0 (4/4)
BEGIN
        1 MATRLQYDNN NCEIGVFSKL TNAYCLVSAT SASANFFTGY ESKLKGVIPI VTTSIGGSGT
       61 IGSLCVGNKN GLLLSHTITD QELQHLRDSL PDEVVVQRIE EPICALGNAI ACNDYVALVH
      121 PKLEKDTEEI ISDVLGVEVY RQTIANNELV GSYCSLSNNG GMVHSNTNVE EMVELANLVQ
      181 VPLVAGTVNR GSQVISAGLT VNDWTAFCGS DTTAVELSVV NNIFKLVQSQ PDFVGSEMRK
      241 SLIDTYV
//