LOCUS AEC09734.1 927 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ubiquitin-protein ligase protein.
ACCESSION CP002685-5927
PROTEIN_ID AEC09734.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="HOS1"
/locus_tag="AT2G39810"
/gene_synonym="EARLY IN SHORT DAYS 6"
/gene_synonym="ESD6"
/gene_synonym="HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE
GENES 1"
/gene_synonym="T5I7.11"
/gene_synonym="T5I7_11"
/inference="Similar to RNA sequence,
EST:INSD:EG436947.1,INSD:AV548251.1,INSD:EG436927.1,
INSD:ES152969.1,INSD:EG436924.1,INSD:EG436943.1,
INSD:DR258928.1,INSD:EG436916.1,INSD:EG436922.1,
INSD:EG436946.1,INSD:BP782967.1,INSD:AU227688.1,
INSD:EG436937.1,INSD:EG436935.1,INSD:AU236719.1,
INSD:BP865909.1,INSD:EG436920.1,INSD:EG436944.1,
INSD:DR258929.1,INSD:EG436950.1,INSD:EG436952.1,
INSD:EL061213.1,INSD:EG436945.1,INSD:EG436936.1,
INSD:DR258930.1,INSD:ES008851.1,INSD:EG436918.1,
INSD:EG436921.1,INSD:EG436948.1,INSD:EG436953.1,
INSD:BP778943.1,INSD:EG436930.1,INSD:BP785413.1,
INSD:EG436958.1,INSD:AV529965.1,INSD:EG436933.1,
INSD:EH900005.1,INSD:EG436934.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY464599.1,INSD:AY464600.1,INSD:BT004255.1,
INSD:BT005517.1"
/note="HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1
(HOS1); FUNCTIONS IN: ubiquitin-protein ligase activity;
INVOLVED IN: response to cold, negative regulation of
transcription, protein ubiquitination; LOCATED IN:
nucleus, cytoplasm; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 12 growth stages; Has 239 Blast hits to
237 proteins in 68 species: Archae - 0; Bacteria - 0;
Metazoa - 131; Fungi - 0; Plants - 80; Viruses - 5; Other
Eukaryotes - 23 (source: NCBI BLink)."
/db_xref="Araport:AT2G39810"
/db_xref="TAIR:AT2G39810"
intron_pos 31:0 (1/9)
intron_pos 161:1 (2/9)
intron_pos 206:1 (3/9)
intron_pos 265:0 (4/9)
intron_pos 399:0 (5/9)
intron_pos 452:0 (6/9)
intron_pos 616:0 (7/9)
intron_pos 662:0 (8/9)
intron_pos 874:2 (9/9)
BEGIN
1 MDTREINGFA SAARSISLPT QPNYSSKPVQ EALKHLASIN LRELCNEAKV ERCRATRDLA
61 SCGRFVNYVL NPCGHASLCT ECCQRCDVCP ICRSTLPKFG DRLRLRLYYE CVEAGLISRT
121 HEEASQDSDE DEHQLAADVH RLYSLFDVAM NNNLISVVCH YITNVCMDET AVSSDPVIAF
181 LLDEVVVKDW VKRTFRSTLA ELQEIYNLET KEMQAWLDKL LRCSKQVAGI CSVLEVMESA
241 FKGSVSPQLQ DVQTLRENIG KTKQHLDIMV WCIRHGFLDD VRSRYSNFTS WNALVGERKS
301 NAVKRAWPDA VDQSSDCSVQ SASLFIEDAL ENLEREPEYS QEIGADLEVG RLQKDKRSFL
361 RSKIEGTSGS YPFENLRTAA DMLFLHGGSD LVVAKQAIFL YYLFDRHWTT PEKYWKHTID
421 DFAATFGITR HSLLESFVFY LLDDHSEEAL QEACRILPEI CGPETYPKVA QVLLERDNPE
481 TALMVLRWSG RDGVSELVSI GEAVTALRVR VECGLLSEAF TYQRTLCLKV KENNLKNGAV
541 KHASDDLDIW SWTEWMEILV NEFCCLSIRR NLVDRIIELP WNPDEEKYLH RCLLDSATDD
601 PSSAVGSLLV VFYLQRYRYI QAYQVDLRLQ KIEEAFVSDN QIGEEVMFRM RSQSHWRKEL
661 VDRAIDILPV IQQQQVRSGQ FSEMEDASEG AKKSDLPDAP DMITSSVPFA TTNSVFLQSA
721 NNARAREPVA NNGSPFQPGH MIGNASHDLS HGRLFTNANR GQKSEVRSVT KNLKFGEMST
781 PFKDLNRARG NSQLQGKRTE ESSPEVNVDR YIENNMSSPY LRRITANNPV TVKSSSNHLN
841 GSSQKPESTF FGTRMQPDKD NFVDLDDPMD MSSSLKDNNN NVLATESRNN SGGLRWRSDE
901 TSDDEDELTS FGSMPVKGRR RRRFAAR
//