LOCUS       AEC09704.1               428 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana Radical SAM superfamily protein protein.
ACCESSION   CP002685-5885
PROTEIN_ID  AEC09704.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G39670"
                     /gene_synonym="F17A14.4"
                     /gene_synonym="F17A14_4"
                     /inference="Similar to RNA sequence,
                     EST:INSD:DR366163.1,INSD:BP843946.1,INSD:EH845290.1,
                     INSD:EL124550.1,INSD:BP792860.1,INSD:DR366165.1,
                     INSD:DR366162.1,INSD:BP635983.1,INSD:BP850515.1,
                     INSD:AV563447.1,INSD:EL177962.1,INSD:AV799456.1,
                     INSD:EH806756.1,INSD:AA042246.1,INSD:EL133816.1,
                     INSD:BP850954.1,INSD:BP790954.1,INSD:AV525113.1,
                     INSD:BP647999.1,INSD:EL253971.1,INSD:AV829333.1,
                     INSD:AV827799.1,INSD:AV808740.1,INSD:EL143750.1,
                     INSD:AV805672.1,INSD:T75645.1,INSD:AI992531.1,
                     INSD:AV525806.1,INSD:AA713024.1,INSD:EH989969.1,
                     INSD:DR366164.1,INSD:EL201476.1,INSD:AV784726.1,
                     INSD:EH811458.1,INSD:AV797280.1,INSD:BU635403.1,
                     INSD:ES205591.1,INSD:EL271625.1,INSD:BP606687.1,
                     INSD:ES123155.1,INSD:DR244661.1,INSD:EL269968.1,
                     INSD:BP669340.1,INSD:BP811945.1,INSD:AV524088.1,
                     INSD:EL020036.1,INSD:BP781665.1,INSD:EH860163.1,
                     INSD:AV518344.1,INSD:BP619418.1,INSD:EL988791.1,
                     INSD:EL006103.1,INSD:CF773903.1,INSD:EH915937.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BT000060.1,INSD:BX820834.1,INSD:BX820149.1,
                     INSD:AY054250.1,INSD:BX820319.1,INSD:AY062813.1"
                     /note="Radical SAM superfamily protein; FUNCTIONS IN:
                     iron-sulfur cluster binding, catalytic activity, RNA
                     methyltransferase activity; INVOLVED IN: rRNA processing;
                     LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures;
                     EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
                     DOMAIN/s: Elongator protein 3/MiaB/NifB
                     (InterPro:IPR006638), Ribosomal RNA large subunit
                     methyltransferase RlmN; (InterPro:IPR004383), Radical SAM
                     (InterPro:IPR007197); BEST Arabidopsis thaliana protein
                     match is: Radical SAM superfamily protein
                     (TAIR:AT3G19630.1); Has 7017 Blast hits to 7011 proteins
                     in 2312 species: Archae - 11; Bacteria - 5106; Metazoa -
                     1; Fungi - 1; Plants - 134; Viruses - 5; Other Eukaryotes
                     - 1759 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G39670"
                     /db_xref="TAIR:AT2G39670"
     intron_pos      82:0 (1/9)
     intron_pos      107:1 (2/9)
     intron_pos      140:0 (3/9)
     intron_pos      175:0 (4/9)
     intron_pos      204:0 (5/9)
     intron_pos      243:0 (6/9)
     intron_pos      277:2 (7/9)
     intron_pos      324:1 (8/9)
     intron_pos      370:0 (9/9)
BEGIN
        1 MMTTTTNTMA MLQNLVFSVP ISRMVVRRHS LATTFSAAAT TVVPSPKPVS AKPARTPHVD
       61 SHVLIGMSEP ELQELAINLG QEGYRGKQLH HLIYKRKVNK VEDFSNLPLT FRKGLVDGGF
      121 KVGRSPIYQT VTATDGTIKL LLKLEDNLLI ETVGIPVQDD EKGITRLTAC VSSQVGCPLR
      181 CSFCATGKGG FSRNLQRHEI IEQVLAIEDV FKHRVTNVVF MGMGEPMLNL KSVLDAHRCL
      241 NKDIEIGQRM ITISTVGVPN TIKKLASHKL QSTLAVSLHA PNQSLREKIV PSAKAYPLEA
      301 IMKDCRDYFQ ETNRRVSFEY ALLAGVNDQV EHAVELAELL REWGKTYHVN LIPYNPIEGS
      361 EYQRPYKKAV LAFAAALESR KITASVRQTR GLDASAACGQ LRNKFQKSPL LTETDSQESQ
      421 PDAEAVAC
//