LOCUS AEC09698.1 836 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002685-5877
PROTEIN_ID AEC09698.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G39620"
/gene_synonym="F12L6.28"
/gene_synonym="F12L6_28"
/inference="Similar to RNA sequence,
EST:INSD:ES171560.1,INSD:ES170318.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT3G09040.1); Has 57584 Blast hits to 13450
proteins in 210 species: Archae - 0; Bacteria - 3; Metazoa
- 36; Fungi - 107; Plants - 56697; Viruses - 0; Other
Eukaryotes - 741 (source: NCBI BLink)."
/db_xref="Araport:AT2G39620"
/db_xref="TAIR:AT2G39620"
BEGIN
1 MPINYTNLLL MLRECKNFRC LLQVHGSLIV SGLKPHNQLI NAYSLFQRQD LSRVIFDSVR
61 DPGVVLWNSM IRGYTRAGLH REALGFFGYM SEEKGIDPDK YSFTFALKAC AGSMDFKKGL
121 RIHDLIAEMG LESDVYIGTA LVEMYCKARD LVSARQVFDK MHVKDVVTWN TMVSGLAQNG
181 CSSAALLLFH DMRSCCVDID HVSLYNLIPA VSKLEKSDVC RCLHGLVIKK GFIFAFSSGL
241 IDMYCNCADL YAAESVFEEV WRKDESSWGT MMAAYAHNGF FEEVLELFDL MRNYDVRMNK
301 VAAASALQAA AYVGDLVKGI AIHDYAVQQG LIGDVSVATS LMSMYSKCGE LEIAEQLFIN
361 IEDRDVVSWS AMIASYEQAG QHDEAISLFR DMMRIHIKPN AVTLTSVLQG CAGVAASRLG
421 KSIHCYAIKA DIESELETAT AVISMYAKCG RFSPALKAFE RLPIKDAVAF NALAQGYTQI
481 GDANKAFDVY KNMKLHGVCP DSRTMVGMLQ TCAFCSDYAR GSCVYGQIIK HGFDSECHVA
541 HALINMFTKC DALAAAIVLF DKCGFEKSTV SWNIMMNGYL LHGQAEEAVA TFRQMKVEKF
601 QPNAVTFVNI VRAAAELSAL RVGMSVHSSL IQCGFCSQTP VGNSLVDMYA KCGMIESSEK
661 CFIEISNKYI VSWNTMLSAY AAHGLASCAV SLFLSMQENE LKPDSVSFLS VLSACRHAGL
721 VEEGKRIFEE MGERHKIEAE VEHYACMVDL LGKAGLFGEA VEMMRRMRVK TSVGVWGALL
781 NSSRMHCNLW LSNAALCQLV KLEPLNPSHY SQDRRLGEVN NVSRIKKVPA CSWIEV
//