LOCUS AEC09691.1 178 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Uncharacterized protein family (UPF0497)
protein.
ACCESSION CP002685-5869
PROTEIN_ID AEC09691.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G39530"
/gene_synonym="CASP-like protein 4D1"
/gene_synonym="CASPL4D1"
/gene_synonym="F12L6.19"
/gene_synonym="F12L6_19"
/inference="Similar to RNA sequence,
EST:INSD:EL263992.1,INSD:EH797974.1,INSD:EG445860.1,
INSD:AU231144.1,INSD:EH877469.1,INSD:BP854356.1,
INSD:EG445892.1,INSD:AV545740.1,INSD:EL011471.1,
INSD:EL047314.1,INSD:EH900738.1,INSD:EG445858.1,
INSD:EG445856.1,INSD:EH874404.1,INSD:EH836151.1,
INSD:EG445857.1,INSD:AV549582.1,INSD:AV537604.1,
INSD:N65640.1,INSD:EG445855.1,INSD:EL169019.1,
INSD:EG445859.1,INSD:EG445891.1,INSD:EH877336.1,
INSD:EL073301.1,INSD:EH851459.1,INSD:EL077996.1,
INSD:BP853693.1,INSD:EG459282.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT005644.1,INSD:AK118915.1"
/note="Uncharacterised protein family (UPF0497); CONTAINS
InterPro DOMAIN/s: Uncharacterised protein family UPF0497,
trans-membrane plant (InterPro:IPR006702), Uncharacterised
protein family UPF0497, trans-membrane plant subgroup
(InterPro:IPR006459); BEST Arabidopsis thaliana protein
match is: Uncharacterised protein family (UPF0497)
(TAIR:AT2G39518.1); Has 200 Blast hits to 200 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 200; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="Araport:AT2G39530"
/db_xref="TAIR:AT2G39530"
intron_pos 60:2 (1/2)
intron_pos 103:0 (2/2)
BEGIN
1 MAPPPPAPPS VTLRTVLLLL RVLTAAFLLI TVVLISTNTV TLEISSTSIK LPFNDVYAYR
61 YMLSAAVIGL VYAVVQLFLT ISQFATGKTH PLTYQFDFYG DKVISYLLAT GSAAGFGVSK
121 DLKDTYIALI EFDSTDPVDK FFSKGYASAS LLLFAFVSLA VLSVFSSLAL SKRPVPVS
//