LOCUS AEC09685.1 1407 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana P-glycoprotein 6 protein.
ACCESSION CP002685-5862
PROTEIN_ID AEC09685.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="ABCB6"
/locus_tag="AT2G39480"
/gene_synonym="ATP-binding cassette B6"
/gene_synonym="F12L6.14"
/gene_synonym="F12L6_14"
/gene_synonym="P-glycoprotein 6"
/gene_synonym="PGP6"
/inference="Similar to RNA sequence,
EST:INSD:EH942525.1,INSD:EL058181.1,INSD:AV827252.1,
INSD:EL199384.1,INSD:EL012371.1,INSD:BP787274.1,
INSD:EL037436.1,INSD:EL264373.1,INSD:AV566296.1,
INSD:AV523851.1,INSD:EH929496.1,INSD:AV548401.1,
INSD:BE526478.1,INSD:EH936888.1,INSD:EL010026.1,
INSD:ES075581.1,INSD:AV441339.2,INSD:BP796098.1,
INSD:ES145940.1,INSD:AV806068.1,INSD:BP665993.1,
INSD:EL214194.1,INSD:EL282202.1,INSD:EL051489.1,
INSD:BX839436.1,INSD:ES167821.1,INSD:BP786316.1,
INSD:EH870587.1,INSD:EL249554.1,INSD:EH972040.1,
INSD:AV797659.1,INSD:T46752.1,INSD:AV789184.1,
INSD:DR372550.1,INSD:ES101563.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK226191.1,INSD:AY094398.1"
/note="P-glycoprotein 6 (PGP6); FUNCTIONS IN: ATPase
activity, coupled to transmembrane movement of substances;
INVOLVED IN: transport, transmembrane transport; LOCATED
IN: nucleus, plasma membrane; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS
InterPro DOMAIN/s: ATPase, AAA+ type, core
(InterPro:IPR003593), ABC transporter-like
(InterPro:IPR003439), ABC transporter, transmembrane
domain, type 1 (InterPro:IPR011527), ABC transporter
integral membrane type 1 (InterPro:IPR017940), ABC
transporter, transmembrane domain (InterPro:IPR001140);
BEST Arabidopsis thaliana protein match is: P-glycoprotein
20 (TAIR:AT3G55320.1); Has 727628 Blast hits to 364161
proteins in 4096 species: Archae - 12661; Bacteria -
576901; Metazoa - 18207; Fungi - 12101; Plants - 9039;
Viruses - 13; Other Eukaryotes - 98706 (source: NCBI
BLink)."
/db_xref="Araport:AT2G39480"
/db_xref="TAIR:AT2G39480"
intron_pos 135:0 (1/10)
intron_pos 153:1 (2/10)
intron_pos 212:0 (3/10)
intron_pos 279:0 (4/10)
intron_pos 365:2 (5/10)
intron_pos 469:1 (6/10)
intron_pos 543:0 (7/10)
intron_pos 656:2 (8/10)
intron_pos 918:1 (9/10)
intron_pos 999:0 (10/10)
BEGIN
1 MMISRGLFGW SPPHIQPLTP VSEVSEPPES PSPYLDPGAE HGGTGTAAQA DDEEEMEEPE
61 EMEPPPAAVP FSQLFACADR FDWVLMVFGS VAAAAHGTAL IVYLHYFAKI VQVLAFPTDS
121 DHLISDDQFN RLLELSLTIV YIAGGVFISG WIEVSCWILT GERQTAVIRS KYVQVLLNQD
181 MSFFDTYGNN GDIVSQVLSD VLLIQSALSE KVGNYIHNMA TFISGLIIGF VNCWEIALIT
241 LATGPFIVAA GGISNIFLHR LAENIQDAYA EAASIAEQAV SYVRTLYAFT NETLAKYSYA
301 TSLQATLRYG ILISLVQGLG LGFTYGLAIC SCAMQLWIGR FFVIHHRANG GEIITALFAV
361 ILSGLGLNQA ATNFYSFDQG RIAAYRLFEM ISRSSSGTNQ EGIILSAVQG NIEFRNVYFS
421 YLSRPEIPIL SGFYLTVPAK KAVALVGRNG SGKSSIIPLM ERFYDPTLGE VLLDGENIKN
481 LKLEWLRSQI GLVTQEPALL SLSIRENIAY GRDATLDQIE EAAKKAHAHT FISSLEKGYE
541 TQVGKTGLTL TEEQKIKLSI ARAVLLDPTI LLLDEVTGGL DFEAERVVQE ALDLLMLGRS
601 TIIIARRLSL IRNADYIAVM EEGQLLEMGT HDELINLGNL YAELLKCEEA TKLPRRMPVR
661 NYNDSAAFQA ERDSSAGRGF QEPSSPKMAK SPSLQRGHNV FRSQELCFNS EESPNDHSPA
721 PEKLGENGSS LDVGEKEPTI KRQDSFEMRL PELPKIDIQC PQRQKSNGSD PESPISPLLI
781 SDPQNERSHS QTFSRPLGHS DDTSASVKVA KDGQHKEPPS FWRLAQLSFP EWLYAVLGSI
841 GAAIFGSFNP LLAYVIALVV TTYYTSKGSH LREEVDKWCL IIACMGIVTV VANFLQHFYF
901 GIMGEKMTER VRRMMFSAML RNEVGWYDEE ENSPDTLSMR LANDATFVRA AFSNRLSIFI
961 QDSFAVIVAI LIGLLLGWRL ALVALATLPV LTLSAIAQKL WLAGFSKGIQ EMHRKASLVL
1021 EDAVRNIYTV VAFCAGNKVM ELYRLQLQRI LRQSFFHGMA IGFAFGFSQF LLFACNALLL
1081 WYTALSVDRR YMKLSTALTE YMVFSFATFA LVEPFGLAPY ILKRRRSLAS VFEIIDRVPT
1141 IEPDDTSALS PPNVYGSIEL KNIDFCYPTR PEVLVLSNFS LKVNGGQTVA VVGVSGSGKS
1201 TIISLIERYY DPVAGQVLLD GRDLKSYNLR WLRSHMGLIQ QEPIIFSTTI RENIIYARHN
1261 ASEAEMKEAA RIANAHHFIS SLPHGYDTHI GMRGVELTQG QKQRIAIARV VLKNAPILLI
1321 DEASSSIESE SSRVVQEALD TLIMGNKTTI LIAHRVAMMR HVDNIVVLNG GKIVEEGTHD
1381 CLAGKNGLYV RLMQPHFGKN LRRHQLI
//