LOCUS AEC09647.1 499 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana PATATIN-like protein 6 protein.
ACCESSION CP002685-5805
PROTEIN_ID AEC09647.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="PLP6"
/locus_tag="AT2G39220"
/gene_synonym="PATATIN-like protein 6"
/gene_synonym="PLA IIB"
/gene_synonym="T16B24.14"
/gene_synonym="T16B24_14"
/inference="Similar to RNA sequence,
EST:INSD:BP803902.1,INSD:ES108856.1,INSD:AV825723.1,
INSD:EH888134.1,INSD:ES189110.1,INSD:AV785974.1,
INSD:AV792118.1,INSD:BP580906.1,INSD:AI999386.1,
INSD:ES036316.1,INSD:ES132175.1,INSD:EL095585.1,
INSD:BP572845.1,INSD:EL095508.1,INSD:ES208874.1,
INSD:EH941503.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT000763.1,INSD:AY062648.1,INSD:BT008869.1"
/note="PATATIN-like protein 6 (PLP6); FUNCTIONS IN:
nutrient reservoir activity; INVOLVED IN: metabolic
process, lipid metabolic process; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Acyl transferase/acyl
hydrolase/lysophospholipase (InterPro:IPR016035), Patatin
(InterPro:IPR002641); BEST Arabidopsis thaliana protein
match is: patatin-like protein 6 (TAIR:AT3G54950.1); Has
1294 Blast hits to 1292 proteins in 232 species: Archae -
0; Bacteria - 327; Metazoa - 139; Fungi - 43; Plants -
635; Viruses - 0; Other Eukaryotes - 150 (source: NCBI
BLink)."
/db_xref="Araport:AT2G39220"
/db_xref="TAIR:AT2G39220"
intron_pos 398:0 (1/1)
BEGIN
1 MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF
61 LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT VKNQRGKVCV LSIDSGGMRG
121 IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED
181 TWRFLAMKGK SFYNKSPPGI LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL
241 IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301 DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH
361 WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG SSFGPCKPNI DTDASPSNVN
421 MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ
481 SGDRRVDQQT IFKDIDCMF
//