LOCUS AEC09620.1 692 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Zinc finger (C3HC4-type RING finger)
family protein protein.
ACCESSION CP002685-5769
PROTEIN_ID AEC09620.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G38970"
/gene_synonym="T7F6.14"
/gene_synonym="T7F6_14"
/inference="Similar to RNA sequence,
EST:INSD:EH820121.1,INSD:EH958640.1,INSD:AV781813.1,
INSD:BP783854.1,INSD:EH875552.1,INSD:BP783972.1,
INSD:BP619876.1,INSD:BE520905.1,INSD:BE520906.1,
INSD:EH845128.1,INSD:EL212869.1,INSD:BP588996.1,
INSD:BE529149.1,INSD:BP574400.1,INSD:BE520907.1,
INSD:AV821383.1"
/inference="similar to RNA sequence, mRNA:INSD:AY075691.1"
/note="Zinc finger (C3HC4-type RING finger) family
protein; FUNCTIONS IN: ubiquitin-protein ligase activity,
zinc ion binding; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841),
Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von
Willebrand factor, type A (InterPro:IPR002035); BEST
Arabidopsis thaliana protein match is: Zinc finger
(C3HC4-type RING finger) family protein
(TAIR:AT3G54780.1); Has 4418 Blast hits to 4397 proteins
in 764 species: Archae - 94; Bacteria - 1613; Metazoa -
1251; Fungi - 170; Plants - 535; Viruses - 5; Other
Eukaryotes - 750 (source: NCBI BLink)."
/db_xref="Araport:AT2G38970"
/db_xref="TAIR:AT2G38970"
intron_pos 71:0 (1/1)
BEGIN
1 MGTRWRRMKL ALGLNLCTYL PRTLEESPTP LNSTERLSDV ALLSPLNWPM TPTPSSHGLK
61 LSRNSSKSSK TCSICLNKMK EGGGHALFTA ECSHSFHFHC IASNVKHGNQ VCPVCRAKWK
121 EIPMQHPSFD LPYLFARSYN NDAAISLVHR LPRSRGVMNQ GRGLAPEPSM FDDDERLEQQ
181 LVFSGKSYSD ALENNHPVRM MDLKIYPEVS AVPRADSREK FDVLVHLRAA AMVTGNANSL
241 NNQISRYPRA PVDLVTVLDI SGSMAGTKLA LLKRAMGFVI QNLGSNDRLS VIAFSSTARR
301 LFPLTKMSDA GRQRALQAVN SVVANGGTNI AEGLRKGVKV MEDRRDKNPV ASIILLSDGR
361 DTYTMNQADP NYKLLLPLSM HGCESKRFQI PVHSFGFGSD HDASLMHSVS ETSGGTFSFI
421 ESESVIQDAL AQCIGGLLSV AVQELRLEIE GMCSDVHLSS IKAGSYQSLV SGDGRSGCVD
481 IGDLYADEER DFLISVNIPP QKDGNETPLL KMRCVYKDLL TKEIVTLQSH MLKIQRPETV
541 GQEVVVSIEV DRQRNRFLAA EAMVKARALA EREDLAAGVT AIQNFRVALA ETVSAKSGDG
601 FCVALDRELK EMQERMASRH VYEVSGRAYI LSGLSSHSWQ RATSRGESGD GSSFVQAYYQ
661 TPSMVEMLHR SQATSHHHRL IQPLFASQPK PR
//